RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TDHQ8IZJ6 230 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 CYP2W1Q8TAV3 490 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 CAGE1Q8TC20 777 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 TRIM43Q96BQ3 446 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-223ENST00000557511 KIF2CQ99661 725 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 TRMT13Q9NUP7 481 aaKnown RBP9.42□□□□□ -0.9
PSEN1-223ENST00000557511 HDAC6Q9UBN7 1215 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
PSEN1-223ENST00000557511 GTF2IRD1Q9UHL9 959 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 TBX21Q9UL17 535 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 SMC3Q9UQE7 1217 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 PDE4DIPQ5VU43 2346 aa9.42□□□□□ -0.9
PSEN1-223ENST00000557511 GRIN2DO15399 1336 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 NRCAMQ92823 1304 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 RRN3P2A6NIE6 340 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 H3BQV1 296 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 HAS3O00219 553 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 CCNT1O60563 726 aaKnown RBP9.41□□□□□ -0.9
PSEN1-223ENST00000557511 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
PSEN1-223ENST00000557511 CYP2C9P11712 490 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 FDPSP14324 419 aaKnown RBP9.41□□□□□ -0.9
PSEN1-223ENST00000557511 SFNP31947 248 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 SLC26A2P50443 739 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 STAT5BP51692 787 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 JAK3P52333 1124 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 PTK7Q13308 1070 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 Q4G0T1 1027 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 HABP4Q5JVS0 413 aaKnown RBP9.41□□□□□ -0.9
PSEN1-223ENST00000557511 LRCH2Q5VUJ6 765 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 KRT40Q6A162 431 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 ZNF746Q6NUN9 644 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-223ENST00000557511 KAT2BQ92831 832 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 ATP6V0A1Q93050 837 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 TMX3Q96JJ7 454 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 RIT2Q99578 217 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 C16orf70Q9BSU1 422 aa9.41□□□□□ -0.9
PSEN1-223ENST00000557511 NOL7Q9UMY1 257 aaKnown RBP9.41□□□□□ -0.9
PSEN1-223ENST00000557511 EMSYQ7Z589 1322 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 IGLV3-22A0A075B6J6 115 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 GSTTP1A0A1W2PQM5 241 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 WDR64B1ANS9 1081 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 DKC1O60832 514 aaKnown RBP eCLIP9.4□□□□□ -0.9
PSEN1-223ENST00000557511 RPLP2P05387 115 aaKnown RBP9.4□□□□□ -0.9
PSEN1-223ENST00000557511 PFKMP08237 780 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 SMIM10L2AP0DMW4 78 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 SMIM10L2BP0DMW5 78 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 ACTN1P12814 892 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 MARK3P27448 753 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 CYP2C18P33260 490 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 RFC2P35250 354 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 CCL23P55773 120 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 PPFIA1Q13136 1202 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 ITGB3BPQ13352 177 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-223ENST00000557511 PPP4R3AQ6IN85 833 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 GDF6Q6KF10 455 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-223ENST00000557511 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 PSRC1Q6PGN9 363 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-223ENST00000557511 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 TRIM50Q86XT4 487 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 AFAP1L1Q8TED9 768 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 CRYGNQ8WXF5 182 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 FAM20AQ96MK3 541 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 NOC4LQ9BVI4 516 aaKnown RBP9.4□□□□□ -0.9
PSEN1-223ENST00000557511 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.9
PSEN1-223ENST00000557511 BCAS3Q9H6U6 928 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 ZNF302Q9NR11 478 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 KIAA1217Q5T5P2 1943 aa9.4□□□□□ -0.9
PSEN1-223ENST00000557511 CYP3A7-CYP3A51PA0A087WV96 503 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 M0QZ92 97 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 M0R2N6 131 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 MSH4O15457 936 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 CHMP2AO43633 222 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 DTNBO60941 627 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 TDP2O95551 362 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 FGBP02675 491 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
PSEN1-223ENST00000557511 CSF2RAP15509 400 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 CYP3A7P24462 503 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 IGBP1P78318 339 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 GUCY1B3Q02153 619 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 NR5A1Q13285 461 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 SWSAP1Q6NVH7 229 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 TAF2Q6P1X5 1199 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 MIER3Q7Z3K6 550 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 SLFN12Q8IYM2 578 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 RDM1Q8NG50 284 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 PPP1R13LQ8WUF5 828 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 FAM167AQ96KS9 214 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
PSEN1-223ENST00000557511 UIMC1Q96RL1 719 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 FOXP1Q9H334 677 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-223ENST00000557511 RNPEPQ9H4A4 650 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 IL23AQ9NPF7 189 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 DISC1Q9NRI5 854 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 NRBP2Q9NSY0 501 aa9.39□□□□□ -0.91
PSEN1-223ENST00000557511 GJB4Q9NTQ9 266 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms