RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 IGBP1P78318 339 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 NR5A1Q13285 461 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 PKP1Q13835 747 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 PLEKHG4Q58EX7 1191 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 SEPT8Q92599 483 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 UIMC1Q96RL1 719 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 TBC1D22BQ9NU19 505 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 TUBE1Q9UJT0 475 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 TRPC6Q9Y210 931 aa23.85■■□□□ 1.41
FOXA1-205ENST00000557418 IGFBP4P22692 258 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 U2AF2P26368 475 aaKnown RBP eCLIP23.84■■□□□ 1.41
FOXA1-205ENST00000557418 CIITAP33076 1130 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 DEFB103AP81534 67 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 SETQ01105 290 aaPredicted RBP23.84■■□□□ 1.41
FOXA1-205ENST00000557418 PRR16Q569H4 304 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 EARS2Q5JPH6 523 aaKnown RBP23.84■■□□□ 1.41
FOXA1-205ENST00000557418 FAM26DQ5JW98 314 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 RUFY4Q6ZNE9 571 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 RPAINQ86UA6 219 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 FOXP1Q9H334 677 aaPredicted RBP23.84■■□□□ 1.41
FOXA1-205ENST00000557418 BRMS1Q9HCU9 246 aa23.84■■□□□ 1.41
FOXA1-205ENST00000557418 VPS37CA5D8V6 355 aaPredicted RBP23.83■■□□□ 1.41
FOXA1-205ENST00000557418 BACH1O14867 736 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 DHX15O43143 795 aaKnown RBP23.83■■□□□ 1.41
FOXA1-205ENST00000557418 CCNE2O96020 404 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 SLC26A2P50443 739 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 USP11P51784 963 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 PLCB4Q15147 1175 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 SAFBQ15424 915 aaKnown RBP eCLIP23.83■■□□□ 1.41
FOXA1-205ENST00000557418 MARCH8Q5T0T0 291 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 FAM160B1Q5W0V3 765 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 ABHD15Q6UXT9 468 aa23.83■■□□□ 1.41
FOXA1-205ENST00000557418 TMCO2Q7Z6W1 182 aaPredicted RBP23.83■■□□□ 1.41
FOXA1-205ENST00000557418 POTEB3A0JP26 581 aa23.82■■□□□ 1.4
FOXA1-205ENST00000557418 MBLAC1A4D2B0 266 aaPredicted RBP23.82■■□□□ 1.4
FOXA1-205ENST00000557418 PDIA4P13667 645 aaKnown RBP23.82■■□□□ 1.4
FOXA1-205ENST00000557418 MIS18BP1Q6P0N0 1132 aa23.82■■□□□ 1.4
FOXA1-205ENST00000557418 POTEBQ6S5H4 581 aa23.82■■□□□ 1.4
FOXA1-205ENST00000557418 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.82■■□□□ 1.4
FOXA1-205ENST00000557418 DNAJB3Q8WWF6 145 aa23.82■■□□□ 1.4
FOXA1-205ENST00000557418 TCEAL9Q9UHQ7 104 aa23.82■■□□□ 1.4
FOXA1-205ENST00000557418 ZDHHC9Q9Y397 364 aa23.82■■□□□ 1.4
FOXA1-205ENST00000557418 IGKV6D-21A0A0A0MT36 114 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 FAM205CA6NFA0 338 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 RBAK-RBAKDNI3L0D1 243 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 EDIL3O43854 480 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 CHRNA1P02708 482 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 AMHP03971 560 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 ADGRE1Q14246 886 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 SWSAP1Q6NVH7 229 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.81■■□□□ 1.4
FOXA1-205ENST00000557418 KRT25Q7Z3Z0 450 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 RAD9AQ99638 391 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 OSBPL7Q9BZF2 842 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 CERS4Q9HA82 394 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 ZNF302Q9NR11 478 aa23.81■■□□□ 1.4
FOXA1-205ENST00000557418 PTPRSQ13332 1948 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 CDH23Q9H251 3354 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 GJB5O95377 273 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 BRD1O95696 1058 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 RPLP2P05387 115 aaKnown RBP23.8■■□□□ 1.4
FOXA1-205ENST00000557418 TAP1Q03518 808 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 RESTQ13127 1097 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 ZNF746Q6NUN9 644 aaPredicted RBP23.8■■□□□ 1.4
FOXA1-205ENST00000557418 FAM117BQ6P1L5 589 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 PDXDC2PQ6P474 469 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 TBCKQ8TEA7 893 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 PPM1EQ8WY54 764 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 PCDHA2Q9Y5H9 948 aa23.8■■□□□ 1.4
FOXA1-205ENST00000557418 MYH9P35579 1960 aaKnown RBP23.8■■□□□ 1.4
FOXA1-205ENST00000557418 HBP1O60381 514 aa23.79■■□□□ 1.4
FOXA1-205ENST00000557418 ZSCAN22P10073 491 aaPredicted RBP23.79■■□□□ 1.4
FOXA1-205ENST00000557418 KRT76Q01546 638 aa23.79■■□□□ 1.4
FOXA1-205ENST00000557418 MCTP1Q6DN14 999 aa23.79■■□□□ 1.4
FOXA1-205ENST00000557418 PIK3AP1Q6ZUJ8 805 aa23.79■■□□□ 1.4
FOXA1-205ENST00000557418 NOSTRINQ8IVI9 506 aa23.79■■□□□ 1.4
FOXA1-205ENST00000557418 APBB2Q92870 758 aa23.79■■□□□ 1.4
FOXA1-205ENST00000557418 ZBTB10Q96DT7 871 aa23.79■■□□□ 1.4
FOXA1-205ENST00000557418 IFIH1Q9BYX4 1025 aaKnown RBP23.79■■□□□ 1.4
FOXA1-205ENST00000557418 FAM49AQ9H0Q0 323 aaPredicted RBP23.79■■□□□ 1.4
FOXA1-205ENST00000557418 MICAL3Q7RTP6 2002 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 IER5Q5VY09 327 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 FERMT3Q86UX7 667 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 CCDC60Q8IWA6 550 aaPredicted RBP23.78■■□□□ 1.4
FOXA1-205ENST00000557418 CKAP2LQ8IYA6 745 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 SMAP1Q8IYB5 467 aaPredicted RBP23.78■■□□□ 1.4
FOXA1-205ENST00000557418 MYOCDQ8IZQ8 938 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 ATP8B4Q8TF62 1192 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 TRAPPC12Q8WVT3 735 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 ARNTL2Q8WYA1 636 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 PCDHA10Q9Y5I2 948 aa23.78■■□□□ 1.4
FOXA1-205ENST00000557418 CHD9Q3L8U1 2897 aa23.77■■□□□ 1.4
FOXA1-205ENST00000557418 CCDC194A0A1B0GVG4 234 aa23.77■■□□□ 1.4
FOXA1-205ENST00000557418 RFXAPO00287 272 aa23.77■■□□□ 1.4
FOXA1-205ENST00000557418 DLL1O00548 723 aa23.77■■□□□ 1.4
FOXA1-205ENST00000557418 PSAPP07602 524 aa23.77■■□□□ 1.4
FOXA1-205ENST00000557418 MRPS6P82932 125 aaKnown RBP23.77■■□□□ 1.4
FOXA1-205ENST00000557418 MGAT3Q09327 533 aa23.77■■□□□ 1.4
FOXA1-205ENST00000557418 NONOQ15233 471 aaKnown RBP eCLIP23.77■■□□□ 1.4
FOXA1-205ENST00000557418 LENG9Q96B70 501 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms