RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 ASH2LQ9UBL3 628 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 TMEM2Q9UHN6 1383 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 LRRIQ1Q96JM4 1722 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 NCOA2Q15596 1464 aa5.51□□□□□ -1.53
CHD8-212ENST00000557329 PRDM15P57071 1507 aaPredicted RBP5.5□□□□□ -1.53
CHD8-212ENST00000557329 COL16A1Q07092 1604 aaPredicted RBP5.5□□□□□ -1.53
CHD8-212ENST00000557329 TCRBV5S2A0A599 114 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 ARVCFO00192 962 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 PLD2O14939 933 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 HOXA5P20719 270 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 GJA4P35212 333 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 NCKAP1LP55160 1127 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 CRY1Q16526 586 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 FNDC3BQ53EP0 1204 aaKnown RBP5.5□□□□□ -1.53
CHD8-212ENST00000557329 HABP4Q5JVS0 413 aaKnown RBP5.5□□□□□ -1.53
CHD8-212ENST00000557329 FAM209AQ5JX71 171 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 YOD1Q5VVQ6 348 aaPredicted RBP5.5□□□□□ -1.53
CHD8-212ENST00000557329 KCNT2Q6UVM3 1135 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 CD300LDQ6UXZ3 194 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 FNIP1Q8TF40 1166 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 EXOC2Q96KP1 924 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 SFMBT1Q9UHJ3 866 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 DSEQ9UL01 958 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 JAG2Q9Y219 1238 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 HCFC2Q9Y5Z7 792 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 ERVK-7P63135 1459 aa5.5□□□□□ -1.53
CHD8-212ENST00000557329 UBR1Q8IWV7 1749 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 MSCO60682 206 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 CHGBP05060 677 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 EPHA5P54756 1037 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 GPR19Q15760 415 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 TAF7LQ5H9L4 462 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 ZC3H7AQ8IWR0 971 aaKnown RBP5.49□□□□□ -1.53
CHD8-212ENST00000557329 GSTCDQ8NEC7 633 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 C20orf173Q96LM9 149 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 CLIC6Q96NY7 704 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 LNPKQ9C0E8 428 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 EPB41L4AQ9HCS5 686 aaPredicted RBP5.49□□□□□ -1.53
CHD8-212ENST00000557329 RRP7BPQ9NSQ0 103 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 SIT1Q9Y3P8 196 aa5.49□□□□□ -1.53
CHD8-212ENST00000557329 RTEL1-TNFRSF6BF6WH68 1400 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 MAP3K1Q13233 1512 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 C6orf222P0C671 652 aaPredicted RBP5.48□□□□□ -1.53
CHD8-212ENST00000557329 FLT3P36888 993 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 KCNC1P48547 511 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 BMS1Q14692 1282 aaKnown RBP5.48□□□□□ -1.53
CHD8-212ENST00000557329 CCDC144BQ3MJ40 725 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.48□□□□□ -1.53
CHD8-212ENST00000557329 FAM124AQ86V42 546 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 MARCH10Q8NA82 808 aaPredicted RBP5.48□□□□□ -1.53
CHD8-212ENST00000557329 PIP4K2CQ8TBX8 421 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 C11orf84Q9BUA3 381 aaPredicted RBP5.48□□□□□ -1.53
CHD8-212ENST00000557329 JAM3Q9BX67 310 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 RXFP1Q9HBX9 757 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 FBXL7Q9UJT9 491 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 PTCH2Q9Y6C5 1203 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 EEA1Q15075 1411 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 CASKIN1Q8WXD9 1431 aa5.48□□□□□ -1.53
CHD8-212ENST00000557329 SHPRHQ149N8 1683 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 RFPL3O75679 317 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 ENO2P09104 434 aaPredicted RBP5.47□□□□□ -1.53
CHD8-212ENST00000557329 RPL13P26373 211 aaKnown RBP5.47□□□□□ -1.53
CHD8-212ENST00000557329 LIMS1P48059 325 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 SARSP49591 514 aaKnown RBP5.47□□□□□ -1.53
CHD8-212ENST00000557329 KIAA2012Q0VF49 1180 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 FIGNQ5HY92 759 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 FAM26FQ5R3K3 315 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 TEPPQ6URK8 271 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 NOP9Q86U38 636 aaKnown RBP5.47□□□□□ -1.53
CHD8-212ENST00000557329 HOMER1Q86YM7 354 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 RELTQ969Z4 430 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 ZBTB8AQ96BR9 441 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 CELF4Q9BZC1 486 aaKnown RBP5.47□□□□□ -1.53
CHD8-212ENST00000557329 ZCCHC4Q9H5U6 513 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 IPPKQ9H8X2 491 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 NCOA5Q9HCD5 579 aaKnown RBP5.47□□□□□ -1.53
CHD8-212ENST00000557329 PARD6AQ9NPB6 346 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 CATSPERZQ9NTU4 200 aa5.47□□□□□ -1.53
CHD8-212ENST00000557329 BLMP54132 1417 aaPredicted RBP5.47□□□□□ -1.53
CHD8-212ENST00000557329 TIAM1Q13009 1591 aa5.46□□□□□ -1.53
CHD8-212ENST00000557329 KANK1Q14678 1352 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 BLACEA4D250 179 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 C9orf118A6NHY6 69 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 C8BP07358 591 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 FAHP16930 419 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
CHD8-212ENST00000557329 TCEA2Q15560 299 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 ARHGAP44Q17R89 818 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 CR1LQ2VPA4 569 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 FOXB2Q5VYV0 432 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 VASNQ6EMK4 673 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 LIPIQ6XZB0 460 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 DDX53Q86TM3 631 aaKnown RBP5.46□□□□□ -1.54
CHD8-212ENST00000557329 CARFQ8N187 725 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 PCDH19Q8TAB3 1148 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 KCNJ15Q99712 375 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 DLL4Q9NR61 685 aa5.46□□□□□ -1.54
CHD8-212ENST00000557329 TMEM260Q9NX78 707 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms