RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 KIF4AO95239 1232 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 GNA14O95837 355 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 OR52Z1P0C646 297 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 FCER1AP12319 257 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 EHHADHQ08426 723 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 KCNMA1Q12791 1236 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 HLTFQ14527 1009 aaKnown RBP eCLIP13.71□□□□□ -0.21
APEX1-216ENST00000557159 ZNF268Q14587 947 aaPredicted RBP13.71□□□□□ -0.21
APEX1-216ENST00000557159 RPS6KA1Q15418 735 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 PPP2R5EQ16537 467 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 TMC3Q7Z5M5 1100 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 CPLX4Q7Z7G2 160 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 ANKRD27Q96NW4 1050 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 ZNF317Q96PQ6 595 aaPredicted RBP13.71□□□□□ -0.21
APEX1-216ENST00000557159 XPO6Q96QU8 1125 aaKnown RBP13.71□□□□□ -0.21
APEX1-216ENST00000557159 PSMD1Q99460 953 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 TXLNGYQ9BZA5 131 aa13.71□□□□□ -0.21
APEX1-216ENST00000557159 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
APEX1-216ENST00000557159 CNOT8Q9UFF9 292 aaKnown RBP13.71□□□□□ -0.21
APEX1-216ENST00000557159 TTC7AQ9ULT0 858 aaPredicted RBP13.71□□□□□ -0.21
APEX1-216ENST00000557159 USP17L12C9JPN9 530 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 USP17L21D6R901 530 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 F8W031 263 aaPredicted RBP13.71□□□□□ -0.22
APEX1-216ENST00000557159 PGRMC1O00264 195 aaKnown RBP13.71□□□□□ -0.22
APEX1-216ENST00000557159 TLR2O60603 784 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 PPFIA2O75334 1257 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 BAG3O95817 575 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 NUDT17P0C025 328 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 SEPT2Q15019 361 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.22
APEX1-216ENST00000557159 FAM83BQ5T0W9 1011 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 SOGA3Q5TF21 947 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 HOOK3Q86VS8 718 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 DZIP1Q86YF9 867 aaKnown RBP13.71□□□□□ -0.22
APEX1-216ENST00000557159 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 SCLT1Q96NL6 688 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 TSG101Q99816 390 aa13.71□□□□□ -0.22
APEX1-216ENST00000557159 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.22
APEX1-216ENST00000557159 DCP1AQ9NPI6 582 aaPredicted RBP13.71□□□□□ -0.22
APEX1-216ENST00000557159 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.22
APEX1-216ENST00000557159 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.71□□□□□ -0.22
APEX1-216ENST00000557159 LRRC37AA6NMS7 1700 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
APEX1-216ENST00000557159 F8VZ95 297 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 ADAMTS3O15072 1205 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 NKRFO15226 690 aaKnown RBP eCLIP13.7□□□□□ -0.22
APEX1-216ENST00000557159 NOL4O94818 638 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 LDHBP07195 334 aaKnown RBP13.7□□□□□ -0.22
APEX1-216ENST00000557159 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
APEX1-216ENST00000557159 GPSM2P81274 684 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 ODF2Q5BJF6 829 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 SV2BQ7L1I2 683 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 DGKHQ86XP1 1220 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 CCDC26Q8TAB7 109 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 ZNF384Q8TF68 577 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 PGM2Q96G03 612 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 CALML4Q96GE6 196 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 CEP63Q96MT8 703 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 KCNMB3Q9NPA1 279 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.7□□□□□ -0.22
APEX1-216ENST00000557159 FBXL5Q9UKA1 691 aa13.7□□□□□ -0.22
APEX1-216ENST00000557159 BZW2Q9Y6E2 419 aaKnown RBP13.7□□□□□ -0.22
APEX1-216ENST00000557159 A0A0A6YYK5 440 aaPredicted RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 WTIPA6NIX2 430 aaPredicted RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 FTCDO95954 541 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 YBX3P16989 372 aaKnown RBP eCLIP13.69□□□□□ -0.226e-9■■□□□ 13.2
APEX1-216ENST00000557159 ATP2B4P23634 1241 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 TMOD1P28289 359 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 PPP4CP60510 307 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 TRADDQ15628 312 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 ZCWPW2Q504Y3 356 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 SLFN11Q7Z7L1 901 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 RTKN2Q8IZC4 609 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 LRRC57Q8N9N7 239 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 HOMER3Q9NSC5 361 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 NOVA2Q9UNW9 492 aaKnown RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 C15orf41Q9Y2V0 281 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 MMP13P45452 471 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 NPEPPSP55786 919 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 MAGOHP61326 146 aaKnown RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 GRM4Q14833 912 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 CCDC63Q8NA47 563 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 MAGOHBQ96A72 148 aaKnown RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 LZTS2Q9BRK4 669 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 RTFDC1Q9BY42 306 aaPredicted RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 POLLQ9UGP5 575 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 INTUQ9ULD6 942 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 DIS3Q9Y2L1 958 aaKnown RBP13.69□□□□□ -0.22
APEX1-216ENST00000557159 COL4A3BPQ9Y5P4 624 aa13.69□□□□□ -0.22
APEX1-216ENST00000557159 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
APEX1-216ENST00000557159 NEBLO76041 1014 aa13.68□□□□□ -0.22
APEX1-216ENST00000557159 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms