RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 AFAP1L1Q8TED9 768 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 DEFB118Q96PH6 123 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 NACC1Q96RE7 527 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 LXNQ9BS40 222 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 PAK6Q9NQU5 681 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-213ENST00000556929 ERAP1Q9NZ08 941 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 RGL1Q9NZL6 768 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 KIAA1024Q9UPX6 916 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 TELO2Q9Y4R8 837 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 MAFBQ9Y5Q3 323 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-213ENST00000556929 IGSF9BQ9UPX0 1349 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 FAM237AA0A1B0GTK4 181 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 LYPLA2O95372 231 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 MYCP01106 439 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 SPATA31C1P0DKV0 1188 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 C7P10643 843 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 HOXD8P13378 290 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 PFKFB1P16118 471 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 PTGS1P23219 599 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 CST5P28325 142 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 SYKP43405 635 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 BEX3Q00994 111 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 KARSQ15046 597 aaKnown RBP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 USP49Q70CQ1 688 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 PDILTQ8N807 584 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 IQUBQ8NA54 791 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 KLHDC9Q8NEP7 349 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 CCDC34Q96HJ3 373 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 FAM167AQ96KS9 214 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 KATNAL1Q9BW62 490 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 PANK2Q9BZ23 570 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 DDX19AQ9NUU7 478 aaKnown RBP10.88□□□□□ -0.67
TMEM260-213ENST00000556929 KCNH3Q9ULD8 1083 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 DNM3Q9UQ16 869 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 HPSEQ9Y251 543 aa10.88□□□□□ -0.67
TMEM260-213ENST00000556929 POTEFA5A3E0 1075 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 MOXD2PA6NHM9 499 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 KBTBD13C9JR72 458 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 H3BRB1 525 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 CTAGE5O15320 804 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 POLR2DO15514 142 aaKnown RBP10.87□□□□□ -0.67
TMEM260-213ENST00000556929 SGPL1O95470 568 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 MBD3O95983 291 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 GJB1P08034 283 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 STAT6P42226 847 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 NDUFA8P51970 172 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 FAM160A1Q05DH4 1040 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 GRB10Q13322 594 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 GSE1Q14687 1217 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 LRRC41Q15345 812 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 XKR3Q5GH77 459 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 CEP57L1Q8IYX8 460 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-213ENST00000556929 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 CCDC43Q96MW1 224 aaKnown RBP10.87□□□□□ -0.67
TMEM260-213ENST00000556929 PNMA5Q96PV4 448 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 PCYT2Q99447 389 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 PLIN2Q99541 437 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 C16orf70Q9BSU1 422 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 MTG1Q9BT17 334 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-213ENST00000556929 TUT1Q9H6E5 874 aaKnown RBP10.87□□□□□ -0.67
TMEM260-213ENST00000556929 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 USP25Q9UHP3 1055 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 OGDHLQ9ULD0 1010 aa10.87□□□□□ -0.67
TMEM260-213ENST00000556929 MYADML2A6NDP7 307 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 E9PMD0 336 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 HBP1O60381 514 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 CABYRO75952 493 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 ZNF202O95125 648 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 F2P00734 622 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 OATP04181 439 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 ASGR1P07306 291 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 PLCG1P19174 1290 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 PSEN2P49810 448 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 PURAQ00577 322 aaKnown RBP10.86□□□□□ -0.67
TMEM260-213ENST00000556929 PRKCEQ02156 737 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 PLCB4Q15147 1175 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 KCNA10Q16322 511 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 ECM1Q16610 540 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 UGCGQ16739 394 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 TMEM119Q4V9L6 283 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 KANK3Q6NY19 840 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 POTEGQ6S5H5 508 aa10.86□□□□□ -0.67
TMEM260-213ENST00000556929 CNNM3Q8NE01 707 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms