RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 FTOQ9C0B1 505 aaKnown RBP eCLIP25.38■■□□□ 1.652e-10■■□□□ 12.9
PABPN1-206ENST00000556809 ZNF302Q9NR11 478 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 MTMR10Q9NXD2 777 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 TUBE1Q9UJT0 475 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 NOL7Q9UMY1 257 aaKnown RBP25.38■■□□□ 1.65
PABPN1-206ENST00000556809 PCDHA10Q9Y5I2 948 aa25.38■■□□□ 1.65
PABPN1-206ENST00000556809 MAFBQ9Y5Q3 323 aaPredicted RBP25.38■■□□□ 1.65
PABPN1-206ENST00000556809 SIP14410 1827 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 PTPRSQ13332 1948 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 POTEB3A0JP26 581 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 VPS37CA5D8V6 355 aaPredicted RBP25.37■■□□□ 1.65
PABPN1-206ENST00000556809 WNT7AO00755 349 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 BACH1O14867 736 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 ACTN1P12814 892 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 ATP2B1P20020 1258 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 FAM26DQ5JW98 314 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 FAM160B1Q5W0V3 765 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 TAF2Q6P1X5 1199 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 POTEBQ6S5H4 581 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 ATP8B4Q8TF62 1192 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 PBX4Q9BYU1 374 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 TRPC6Q9Y210 931 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 SLC4A7Q9Y6M7 1214 aa25.37■■□□□ 1.65
PABPN1-206ENST00000556809 BAIAP3O94812 1187 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 TRAPPC10P48553 1259 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 BECN1Q14457 450 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 LRCH2Q5VUJ6 765 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 POTEDQ86YR6 584 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 TNPO1Q92973 898 aaKnown RBP25.36■■□□□ 1.65
PABPN1-206ENST00000556809 OSBPL7Q9BZF2 842 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 TTYH1Q9H313 450 aaPredicted RBP25.36■■□□□ 1.65
PABPN1-206ENST00000556809 KCNMB3Q9NPA1 279 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 TCEAL9Q9UHQ7 104 aa25.36■■□□□ 1.65
PABPN1-206ENST00000556809 WDR64B1ANS9 1081 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 GAS7O60861 476 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 PSAPP07602 524 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 DNAJB2P25686 324 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 PBX2P40425 430 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 IGBP1P78318 339 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 ZNF697Q5TEC3 545 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 PDXDC2PQ6P474 469 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 CNKSR3Q6P9H4 555 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 SPRYD3Q8NCJ5 442 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 TRAPPC12Q8WVT3 735 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 ZBTB10Q96DT7 871 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 TEKT3Q9BXF9 490 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 SEMA6BQ9H3T3 888 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 UNC45AQ9H3U1 944 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 DISC1Q9NRI5 854 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 IGSF9BQ9UPX0 1349 aa25.35■■□□□ 1.65
PABPN1-206ENST00000556809 TMEM265A0A087WTH1 108 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 ZBBXA8MT70 800 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 TBX3O15119 743 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 HBP1O60381 514 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 NEMFO60524 1076 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 CTSHP09668 335 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 TTC38Q5R3I4 469 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 FAM20AQ96MK3 541 aa25.34■■□□□ 1.65
PABPN1-206ENST00000556809 ZBTB42B2RXF5 422 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 CHRNA1P02708 482 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 SFNP31947 248 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 MCM7P33993 719 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 MGAT3Q09327 533 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 ORC2Q13416 577 aaPredicted RBP25.33■■□□□ 1.65
PABPN1-206ENST00000556809 DNAJB3Q8WWF6 145 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 GUCD1Q96NT3 240 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 GABBR1Q9UBS5 961 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 PCDHA2Q9Y5H9 948 aa25.33■■□□□ 1.65
PABPN1-206ENST00000556809 COL1A2P08123 1366 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 STX6O43752 255 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 MARCH6O60337 910 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 ATP2A2P16615 1042 aaKnown RBP25.32■■□□□ 1.64
PABPN1-206ENST00000556809 TOB1P50616 345 aaPredicted RBP25.32■■□□□ 1.64
PABPN1-206ENST00000556809 JAK3P52333 1124 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 MKRN4PQ13434 485 aaPredicted RBP25.32■■□□□ 1.64
PABPN1-206ENST00000556809 CALCRLQ16602 461 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 PLEKHG4Q58EX7 1191 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 MTHFD1LQ6UB35 978 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 SLFN12Q8IYM2 578 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 PHOSPHO2Q8TCD6 241 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 BBXQ8WY36 941 aaPredicted RBP25.32■■□□□ 1.64
PABPN1-206ENST00000556809 HAS1Q92839 578 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 SLC9A7Q96T83 725 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 MTMR6Q9Y217 621 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 SAMM50Q9Y512 469 aa25.32■■□□□ 1.64
PABPN1-206ENST00000556809 MICAL3Q7RTP6 2002 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 ABHD14A-ACY1A0A1B0GW23 586 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 CHMP2AO43633 222 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 ZNF862O60290 1169 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 BAG4O95429 457 aaKnown RBP25.31■■□□□ 1.64
PABPN1-206ENST00000556809 WDR5P61964 334 aaKnown RBP25.31■■□□□ 1.64
PABPN1-206ENST00000556809 NBR1Q14596 966 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 ZNF174Q15697 407 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 RILPL1Q5EBL4 403 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 ZNF484Q5JVG2 852 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 BRAPQ7Z569 592 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 FERMT3Q86UX7 667 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 DBF4BQ8NFT6 615 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 RDM1Q8NG50 284 aa25.31■■□□□ 1.64
PABPN1-206ENST00000556809 TIFAQ96CG3 184 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms