RNA–Protein interactions for RNA: ENST00000556551.2

AC005520.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC005520.1, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005520.1-201ENST00000556551 USH1GQ495M9 461 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 PALB2Q86YC2 1186 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 CCDC65Q8IXS2 484 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 WHAMMQ8TF30 809 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 RAPGEF5Q92565 580 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 P2RX7Q99572 595 aaKnown RBP9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 NCAPGQ9BPX3 1015 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 MTFR1LQ9H019 292 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 ISCUQ9H1K1 167 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 DDX4Q9NQI0 724 aaKnown RBP9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 TMOD4Q9NZQ9 345 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 ARMCX3Q9UH62 379 aaPredicted RBP9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 TSKSQ9UJT2 592 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 PNMA2Q9UL42 364 aa9.52□□□□□ -0.88
AC005520.1-201ENST00000556551 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 TMEM110-MUSTN1A8MSY1 372 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 FOXO6A8MYZ6 492 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 USP11P51784 963 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 TPCN2Q8NHX9 752 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 CD209Q9NNX6 404 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 SLC40A1Q9NP59 571 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 LUC7LQ9NQ29 371 aaKnown RBP9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 TAS2R14Q9NYV8 317 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 PPP1R9AQ9ULJ8 1098 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 LEMD3Q9Y2U8 911 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 GMNCA6NCL1 334 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 PGRMC1O00264 195 aaKnown RBP9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 DDX3XO00571 662 aaKnown RBP eCLIP9.52□□□□□ -0.892e-7■■■□□ 17
AC005520.1-201ENST00000556551 MAP2K2P36507 400 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 COG2Q14746 738 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 TBC1D10BQ4KMP7 808 aaPredicted RBP9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 CCDC121Q6ZUS5 278 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 LRRC57Q8N9N7 239 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 PIGOQ8TEQ8 1089 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 ELMO3Q96BJ8 720 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 REEP2Q9BRK0 252 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 ERVK-5Q9HDB9 667 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 RGL1Q9NZL6 768 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 GCNT4Q9P109 453 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 PCNTO95613 3336 aa9.52□□□□□ -0.89
AC005520.1-201ENST00000556551 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 IFNAR2P48551 515 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 GTF2IP78347 998 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 PDIA5Q14554 519 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CCDC38Q502W7 563 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 ZC2HC1CQ53FD0 456 aaPredicted RBP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 COBLL1Q53SF7 1204 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SLC10A5Q5PT55 438 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CATSPER3Q86XQ3 398 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SCFD2Q8WU76 684 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SELENOSQ9BQE4 189 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CCDC113Q9H0I3 377 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 KLC4Q9NSK0 619 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 AIPL1Q9NZN9 384 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SLC12A6Q9UHW9 1150 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 TMEM59LQ9UK28 342 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SPATA31A1Q5TZJ5 1347 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 IRS2Q9Y4H2 1338 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 DOT1LQ8TEK3 1739 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 C6orf229H3BNL8 230 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CHMP2AO43633 222 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 BUB1BO60566 1050 aaPredicted RBP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CAND2O75155 1236 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 GCNT3O95395 438 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 HOXA13P31271 388 aaPredicted RBP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 ARHGAP44Q17R89 818 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 ZNF804AQ7Z570 1209 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CPLX4Q7Z7G2 160 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 PROM2Q8N271 834 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 PLCB1Q9NQ66 1216 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SNX24Q9Y343 169 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 PCDHAC2Q9Y5I4 1007 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 TRIM49P0CI25 452 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 TRIM49CP0CI26 452 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 GALCP54803 685 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 PLTPP55058 493 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 GSTO1P78417 241 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 TCP10Q12799 353 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 PSMD2Q13200 908 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CPNE8Q86YQ8 564 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 CUL5Q93034 780 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 ZKSCAN4Q969J2 545 aaPredicted RBP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 IQCDQ96DY2 449 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 SEC16BQ96JE7 1060 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 MYCBPQ99417 103 aaPredicted RBP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 BHMT2Q9H2M3 363 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 ZNF287Q9HBT7 754 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 MLXIPLQ9NP71 852 aa9.51□□□□□ -0.89
AC005520.1-201ENST00000556551 DLEC1Q9Y238 1755 aa9.5□□□□□ -0.89
AC005520.1-201ENST00000556551 FSBPO95073 299 aa9.5□□□□□ -0.89
AC005520.1-201ENST00000556551 LDHCP07864 332 aa9.5□□□□□ -0.89
AC005520.1-201ENST00000556551 PPP4CP60510 307 aa9.5□□□□□ -0.89
AC005520.1-201ENST00000556551 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms