RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NUBP1P53384 320 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 UBE3AQ05086 875 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 NFX1Q12986 1120 aaKnown RBP16.02■□□□□ 0.16
ACTN1-219ENST00000556432 SEC23AQ15436 765 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 DUSP6Q16828 381 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 TMEM266Q2M3C6 531 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 PLPP4Q5VZY2 271 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 XRRA1Q6P2D8 792 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 USP17L6PQ6QN14 398 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 CYB5R4Q7L1T6 521 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 KREMEN2Q8NCW0 462 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 ATP8B4Q8TF62 1192 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 CDHR1Q96JP9 859 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 DSCC1Q9BVC3 393 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 TMEM260Q9NX78 707 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 NR2E1Q9Y466 385 aa16.02■□□□□ 0.16
ACTN1-219ENST00000556432 PLXNA4Q9HCM2 1894 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 ERICH2A1L162 156 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 PRR23AA6NEV1 266 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 RRN3P2A6NIE6 340 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 PROB1E7EW31 1015 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 CYTH3O43739 400 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 INSRRP14616 1297 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 TRDNQ13061 729 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 MTMR3Q13615 1198 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 CRIPAKQ8N1N5 446 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 AZI2Q9H6S1 392 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 ENTPD7Q9NQZ7 604 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 SQORQ9Y6N5 450 aa16.01■□□□□ 0.15
ACTN1-219ENST00000556432 IGSF9BQ9UPX0 1349 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 PLXNA3P51805 1871 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 GSTTP1A0A1W2PQM5 241 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 DENND3A2RUS2 1198 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
ACTN1-219ENST00000556432 ATP9AO75110 1047 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 KCNA2P16389 499 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 SARSP49591 514 aaKnown RBP16■□□□□ 0.15
ACTN1-219ENST00000556432 ERVFC1P60507 584 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 APOBRQ0VD83 1088 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 PDE12Q6L8Q7 609 aaKnown RBP16■□□□□ 0.15
ACTN1-219ENST00000556432 ANKRD54Q6NXT1 300 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 TRAPPC12Q8WVT3 735 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 GPRASP2Q96D09 838 aa16■□□□□ 0.15
ACTN1-219ENST00000556432 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
ACTN1-219ENST00000556432 HIP1O00291 1037 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 KRT76Q01546 638 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 MTMR1Q13613 665 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 UBALD2Q8IYN6 164 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 COLGALT1Q8NBJ5 622 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
ACTN1-219ENST00000556432 TCF25Q9BQ70 676 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 S1PR5Q9H228 398 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 MFSD1Q9H3U5 465 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-219ENST00000556432 HCSTQ9UBK5 93 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 SEC63Q9UGP8 760 aaKnown RBP15.99■□□□□ 0.15
ACTN1-219ENST00000556432 PUF60Q9UHX1 559 aaKnown RBP15.99■□□□□ 0.15
ACTN1-219ENST00000556432 SORCS3Q9UPU3 1222 aa15.99■□□□□ 0.15
ACTN1-219ENST00000556432 NBL1P41271 181 aa15.98■□□□□ 0.15
ACTN1-219ENST00000556432 WTAPQ15007 396 aa15.98■□□□□ 0.15
ACTN1-219ENST00000556432 ERMP1Q7Z2K6 904 aa15.98■□□□□ 0.15
ACTN1-219ENST00000556432 FRMD5Q7Z6J6 570 aa15.98■□□□□ 0.15
ACTN1-219ENST00000556432 TMEM105Q8N8V8 129 aa15.98■□□□□ 0.15
ACTN1-219ENST00000556432 NKD2Q969F2 451 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-219ENST00000556432 RRP36Q96EU6 259 aaKnown RBP15.98■□□□□ 0.15
ACTN1-219ENST00000556432 ADAM2Q99965 735 aa15.98■□□□□ 0.15
ACTN1-219ENST00000556432 TYW1Q9NV66 732 aaKnown RBP15.98■□□□□ 0.15
ACTN1-219ENST00000556432 FSCN2O14926 492 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 BRD1O95696 1058 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 HOXB8P17481 243 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-219ENST00000556432 ITGB5P18084 799 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 LAG3P18627 525 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 ID4P47928 161 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 SART3Q15020 963 aaKnown RBP15.97■□□□□ 0.15
ACTN1-219ENST00000556432 TPRNQ4KMQ1 711 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 FAM102BQ5T8I3 360 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 DIEXFQ68CQ4 756 aaKnown RBP15.97■□□□□ 0.15
ACTN1-219ENST00000556432 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 CES5AQ6NT32 575 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 SYCE2Q6PIF2 218 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 CATIPQ7Z7H3 387 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 SENP2Q9HC62 589 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 JPH1Q9HDC5 661 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-219ENST00000556432 CDH22Q9UJ99 828 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 PCDHA2Q9Y5H9 948 aa15.97■□□□□ 0.15
ACTN1-219ENST00000556432 GVINP1Q7Z2Y8 2422 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 PIK3CDO00329 1044 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 MEIS2O14770 477 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 RPS6KA5O75582 802 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 CA8P35219 290 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 PLCB4Q15147 1175 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 MCTP2Q6DN12 878 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 ASTLQ6HA08 431 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-219ENST00000556432 TMEM184AQ6ZMB5 413 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 RALYLQ86SE5 291 aaKnown RBP15.96■□□□□ 0.15
ACTN1-219ENST00000556432 ADSSL1Q8N142 457 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 ATP6V0A4Q9HBG4 840 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 C1orf112Q9NSG2 853 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms