RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 USP17L7P0C7H9 530 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 IL15P40933 162 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 PHKA1P46020 1223 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 GSTO1P78417 241 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 MRPS5P82675 430 aaKnown RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 RPS26P11Q5JNZ5 115 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 GJC2Q5T442 439 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 USP38Q8NB14 1042 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 ASB2Q96Q27 587 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 PAGR1Q9BTK6 254 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 DHX36Q9H2U1 1008 aaKnown RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 FLRT1Q9NZU1 646 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 PPM1HQ9ULR3 514 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 MROH7-TTC4A0A0A0MT08 1334 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 PDS5AQ29RF7 1337 aaKnown RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 RFX7Q2KHR2 1363 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 TRIM43BA6NCK2 446 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 KBTBD13C9JR72 458 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 B3GALT4O96024 378 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 ITGB5P18084 799 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 CYP2C19P33261 490 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 CYP27A1Q02318 531 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 MECOMQ03112 1051 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 TLE2Q04725 743 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 SNX17Q15036 470 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 TRIM60Q495X7 471 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 AKNAD1Q5T1N1 836 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 WDR78Q5VTH9 848 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 TP53INP2Q8IXH6 220 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 TRIM43Q96BQ3 446 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-239ENST00000556315 CRELD1Q96HD1 420 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 PDLIM7Q9NR12 457 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 FAM105AQ9NUU6 356 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 ZC3H7BQ9UGR2 993 aaKnown RBP5.93□□□□□ -1.46
ATXN3-239ENST00000556315 AKAP2Q9Y2D5 859 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 UNC80Q8N2C7 3258 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 SYNGAP1Q96PV0 1343 aa5.93□□□□□ -1.46
ATXN3-239ENST00000556315 SPEF2Q9C093 1822 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 E9PSI1 815 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 KIAA0355O15063 1070 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 SEPT4O43236 478 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 STRNO43815 780 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 CNMDO75829 334 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 ECEL1O95672 775 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 BAG3O95817 575 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 RAG1P15918 1043 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 ADORA1P30542 326 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 ADCYAP1R1P41586 468 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 EPHB4P54760 987 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 TIMM10P62072 90 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 JAG1P78504 1218 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 FZD5Q13467 585 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 RASGRF1Q13972 1273 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 GRB14Q14449 540 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 OLFML2BQ68BL8 750 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 CATSPERGQ6ZRH7 1159 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 ZNF765Q7L2R6 523 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 DYMQ7RTS9 669 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 DPP9Q86TI2 863 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 METTL16Q86W50 562 aaKnown RBP5.92□□□□□ -1.46
ATXN3-239ENST00000556315 TEX11Q8IYF3 940 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 TRPV1Q8NER1 839 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 PPM1EQ8WY54 764 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 NSUN4Q96CB9 384 aaKnown RBP5.92□□□□□ -1.46
ATXN3-239ENST00000556315 TIFAQ96CG3 184 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 UHRF1Q96T88 793 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-239ENST00000556315 SIL1Q9H173 461 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 C1GALT1Q9NS00 363 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 SLC5A4Q9NY91 659 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 THEGQ9P2T0 379 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 VCANP13611 3396 aa5.92□□□□□ -1.46
ATXN3-239ENST00000556315 CLTBP09497 229 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 CYBAP13498 195 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 JUNBP17275 347 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-239ENST00000556315 RAB6AP20340 208 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 ITGB8P26012 769 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 ASPAP45381 313 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 ST13P50502 369 aaKnown RBP5.91□□□□□ -1.46
ATXN3-239ENST00000556315 USP14P54578 494 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 FPGSQ05932 587 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 MVPQ14764 893 aaKnown RBP5.91□□□□□ -1.46
ATXN3-239ENST00000556315 LRRC41Q15345 812 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 OGFOD2Q6N063 350 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 ATF7IPQ6VMQ6 1270 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 LBX2Q6XYB7 198 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-239ENST00000556315 AGBL5Q8NDL9 886 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 C3orf58Q8NDZ4 430 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 ZNF384Q8TF68 577 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 ASIC4Q96FT7 647 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 C12orf42Q96LP6 360 aa5.91□□□□□ -1.46
ATXN3-239ENST00000556315 CORO1BQ9BR76 489 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms