RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 PCDHA8Q9Y5H6 950 aa17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 TRPV2Q9Y5S1 764 aa17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 MRPL42Q9Y6G3 142 aaKnown RBP17.68■□□□□ 0.42
SUPT16H-205ENST00000556217 CACNA1AO00555 2505 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 STXBP3O00186 592 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 SH2B2O14492 632 aaPredicted RBP17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 TBX10O75333 385 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 NDUFV1P49821 464 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 PAK2Q13177 524 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 ADAM15Q13444 863 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 UBE2SQ16763 222 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 FAM43BQ6ZT52 329 aaPredicted RBP17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 RNF135Q8IUD6 432 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 PCDHA2Q9Y5H9 948 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 SLC12A7Q9Y666 1083 aa17.67■□□□□ 0.42
SUPT16H-205ENST00000556217 GTF2F1P35269 517 aaKnown RBP eCLIP17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 LIFRP42702 1097 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 IER5LQ5T953 404 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 PLPPR4Q7Z2D5 763 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 HEATR3Q7Z4Q2 680 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 TEX2Q8IWB9 1127 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 NME8Q8N427 588 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 LINC01599Q8WXQ3 324 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 PBXIP1Q96AQ6 731 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 KCNH7Q9NS40 1196 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 LRFN2Q9ULH4 789 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 PADI3Q9ULW8 664 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 IGSF9BQ9UPX0 1349 aa17.66■□□□□ 0.42
SUPT16H-205ENST00000556217 LINC01565O15544 149 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 ITGB1P05556 798 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 SCG2P13521 617 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 RXRAP19793 462 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 TMEM62Q0P6H9 643 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 CAMK1Q14012 370 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 RTN4RL1Q86UN2 441 aaPredicted RBP17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 SUGP1Q8IWZ8 645 aaKnown RBP17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 CRIPAKQ8N1N5 446 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 EFHBQ8N7U6 833 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 FANCBQ8NB91 859 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 KLHL23Q8NBE8 558 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 SPPL3Q8TCT6 385 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 PCYT2Q99447 389 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 MXRA8Q9BRK3 442 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 NFASCO94856 1347 aa17.65■□□□□ 0.42
SUPT16H-205ENST00000556217 SMIM35A0A1B0GVV1 85 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 TMEM221A6NGB7 291 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 M0R296 226 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 GFRA3O60609 400 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 EYA4O95677 639 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 SLC26A2P50443 739 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 STAT5BP51692 787 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 ACTR2P61160 394 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 KRT76Q01546 638 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 PLCB4Q15147 1175 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 PAN2Q504Q3 1202 aaKnown RBP17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 TMTC3Q6ZXV5 915 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 ZBTB10Q96DT7 871 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 MSLNLQ96KJ4 702 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 KDM3AQ9Y4C1 1321 aa17.64■□□□□ 0.41
SUPT16H-205ENST00000556217 PLXNA4Q9HCM2 1894 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 FOSP01100 380 aaPredicted RBP17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 DNAJB1P25685 340 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 ODR4Q5SWX8 454 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 TRIM67Q6ZTA4 783 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 POF1BQ8WVV4 589 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 IRF2BPLQ9H1B7 796 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 AAASQ9NRG9 546 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 PCDHB7Q9Y5E2 793 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 PCDHB12Q9Y5F1 795 aa17.63■□□□□ 0.41
SUPT16H-205ENST00000556217 FSD2A1L4K1 749 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 NRIP1P48552 1158 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 SARSP49591 514 aaKnown RBP17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 NAPAP54920 295 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 TCF15Q12870 199 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 COASYQ13057 564 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 CEP55Q53EZ4 464 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 PPP1R18Q6NYC8 613 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 MTHFD1LQ6UB35 978 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 MICU3Q86XE3 530 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 RAB11FIP4Q86YS3 637 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 SMRP1Q8NCR6 262 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 TRAPPC12Q8WVT3 735 aa17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 FNDC1Q4ZHG4 1894 aaPredicted RBP17.62■□□□□ 0.41
SUPT16H-205ENST00000556217 RIF1Q5UIP0 2472 aaKnown RBP17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 EVPLQ92817 2033 aa17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 SLC27A2O14975 620 aa17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 UBE3AQ05086 875 aa17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 NFX1Q12986 1120 aaKnown RBP17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 SPOUT1Q5T280 376 aaKnown RBP17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 FAM160B1Q5W0V3 765 aa17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 ADGRD2Q7Z7M1 963 aa17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 RBM23Q86U06 439 aaKnown RBP17.61■□□□□ 0.41
SUPT16H-205ENST00000556217 SGMS1Q86VZ5 419 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms