RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SENP7Q9BQF6 1050 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 KCTD10Q9H3F6 313 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 ZHX3Q9H4I2 956 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 OLFML3Q9NRN5 406 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 PKD2L1Q9P0L9 805 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 TBC1D7Q9P0N9 293 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 PFASO15067 1338 aa16.29■□□□□ 0.2
VPS33B-205ENST00000556096 ARHGAP6O43182 974 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ATP9AO75110 1047 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 GUCY2CP25092 1073 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 QARSP47897 775 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ADKP55263 362 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 NOGQ13253 232 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ZC3H3Q8IXZ2 948 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 CCAR2Q8N163 923 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 BANK1Q8NDB2 785 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 BRI3BPQ8WY22 251 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 BAG1Q99933 345 aaPredicted RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 SEL1LQ9UBV2 794 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 DBR1Q9UK59 544 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ODF2LQ9ULJ1 636 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 LOXHD1Q8IVV2 1947 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ZBTB39O15060 712 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 PRKCSHP14314 528 aaPredicted RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 GOLGA8FQ08AF8 430 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 GOLGA8DPQ0D2H9 430 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 BMT2Q1RMZ1 405 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 EDRF1Q3B7T1 1238 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 DNTTIP2Q5QJE6 756 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ZNF746Q6NUN9 644 aaPredicted RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 CNGA4Q8IV77 575 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 PTPN18Q99952 460 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 NOC4LQ9BVI4 516 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 NAA15Q9BXJ9 866 aaKnown RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ASCC2Q9H1I8 757 aaPredicted RBP16.28■□□□□ 0.2
VPS33B-205ENST00000556096 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
VPS33B-205ENST00000556096 ARHGEF35A5YM69 484 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 WDR64B1ANS9 1081 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 RSPH10B2B2RC85 870 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 MFAP3LO75121 409 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 GYPCP04921 128 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 RSPH10BP0C881 870 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 GTF2A2P52657 109 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 ZNF131P52739 623 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 HERVK_113P62684 666 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 MIIPQ5JXC2 388 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 CEP135Q66GS9 1140 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 E4F1Q66K89 784 aaPredicted RBP16.27■□□□□ 0.19
VPS33B-205ENST00000556096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.19
VPS33B-205ENST00000556096 C4orf19Q8IY42 314 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 TRAF3IP3Q9Y228 551 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 SAMM50Q9Y512 469 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 NFASCO94856 1347 aa16.27■□□□□ 0.19
VPS33B-205ENST00000556096 B4DLN1 442 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 IGF2BP3O00425 579 aaKnown RBP eCLIP16.26■□□□□ 0.19
VPS33B-205ENST00000556096 CCP110O43303 1012 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 RGS20O76081 388 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 FAM13AO94988 1023 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 GNA14O95837 355 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 SLC25A27O95847 323 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 FECHP22830 423 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 CASP14P31944 242 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 COPB2P35606 906 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 KNOP1Q1ED39 458 aaKnown RBP16.26■□□□□ 0.19
VPS33B-205ENST00000556096 GNPTABQ3T906 1256 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 ANKRD35Q8N283 1001 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 EEF2KMTQ96G04 330 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 PARVGQ9HBI0 331 aa16.26■□□□□ 0.19
VPS33B-205ENST00000556096 MANSC4A6NHS7 340 aaPredicted RBP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 SPATA31C2B4DYI2 1134 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 PDXKO00764 312 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 EIF3DO15371 548 aaKnown RBP eCLIP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 CNMDO75829 334 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 CCNE2O96020 404 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 CETPP11597 493 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 KCNA2P16389 499 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 OSBPP22059 807 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 CASP5P51878 434 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 TERF1P54274 439 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 MARSP56192 900 aaKnown RBP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 PSMC5P62195 406 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 TBC1D8BQ0IIM8 1120 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 VWA3BQ502W6 1294 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 NELFCDQ8IXH7 590 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 ERGIC2Q96RQ1 377 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 MRPL44Q9H9J2 332 aaKnown RBP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 USP27XA6NNY8 438 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 PES1O00541 588 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms