RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-210ENST00000555718 PDGFDQ9GZP0 370 aaPredicted RBP8.06□□□□□ -1.12
PPP4R3A-210ENST00000555718 MCM8Q9UJA3 840 aa8.06□□□□□ -1.12
PPP4R3A-210ENST00000555718 CROTQ9UKG9 612 aa8.06□□□□□ -1.12
PPP4R3A-210ENST00000555718 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 FAM90A27PA6NNH2 459 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 H7C1D1 291 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 IRF9Q00978 393 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 CD276Q5ZPR3 534 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 FSTL4Q6MZW2 842 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 C11orf74Q86VG3 221 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 DTX3Q8N9I9 347 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 TXNDC5Q8NBS9 432 aaKnown RBP8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 USP7Q93009 1102 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 SCYL1Q96KG9 808 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 CLIC6Q96NY7 704 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 TMEM209Q96SK2 561 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 PCIF1Q9H4Z3 704 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 SMURF1Q9HCE7 757 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 B4GALT6Q9UBX8 382 aa8.05□□□□□ -1.12
PPP4R3A-210ENST00000555718 PTPDC1A2A3K4 754 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 F2P00734 622 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 COL6A1P12109 1028 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 CNR2P34972 360 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 IL13P35225 146 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 MECP2P51608 486 aaKnown RBP8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 ZNF174Q15697 407 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 PTPROQ16827 1216 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 PRAMEF18Q5VWM3 479 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 OTOP1Q7RTM1 612 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 COL4A3BPQ9Y5P4 624 aa8.04□□□□□ -1.12
PPP4R3A-210ENST00000555718 BRINP1O60477 761 aa8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 CLASP2O75122 1294 aaKnown RBP8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 IL2P60568 153 aa8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 SEC23AQ15436 765 aa8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 VASNQ6EMK4 673 aa8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 CXorf38Q8TB03 319 aa8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 TTC1Q99614 292 aa8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 NCANO14594 1321 aa8.03□□□□□ -1.12
PPP4R3A-210ENST00000555718 hCG_2014768A0A024R1R8 64 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 B8ZZF3 427 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 BUD31P41223 144 aaPredicted RBP8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 NFKB2Q00653 900 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 PFKPQ01813 784 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 PCBP1Q15365 356 aaKnown RBP eCLIP8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 SKIDA1Q1XH10 827 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 SKOR2Q2VWA4 1001 aaPredicted RBP8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 FAM26FQ5R3K3 315 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 PASD1Q8IV76 773 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 YTHDC1Q96MU7 727 aaKnown RBP8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 MTFR1LQ9H019 292 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 SLC39A2Q9NP94 309 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 KCNH7Q9NS40 1196 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 RIC8BQ9NVN3 520 aa8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 APOBEC2Q9Y235 224 aaKnown RBP8.02□□□□□ -1.13
PPP4R3A-210ENST00000555718 FAM83GA6ND36 823 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 TRAF5O00463 557 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 PRRG2O14669 202 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 ZEB2O60315 1214 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 KRT37O76014 449 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 PTPN1P18031 435 aaKnown RBP8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 GLRBP48167 497 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 ANAPC15P60006 121 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 DSG1Q02413 1049 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 SEPT7Q16181 437 aaKnown RBP8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 BTBD8Q5XKL5 378 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 NOSTRINQ8IVI9 506 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 MBD6Q96DN6 1003 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 IFT22Q9H7X7 185 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 DLL4Q9NR61 685 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 ZFP69BQ9UJL9 534 aa8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 NOP58Q9Y2X3 529 aaKnown RBP8.01□□□□□ -1.13
PPP4R3A-210ENST00000555718 PRAMEF25A6NGN4 478 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 ZNF839A8K0R7 811 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 IL18BPO95998 194 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 LSSP48449 732 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 KPNA1P52294 538 aaPredicted RBP8□□□□□ -1.13
PPP4R3A-210ENST00000555718 STRN3Q13033 797 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 ZFYVE27Q5T4F4 411 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 TRMT10BQ6PF06 316 aaKnown RBP8□□□□□ -1.13
PPP4R3A-210ENST00000555718 AFAP1L2Q8N4X5 818 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 EFHBQ8N7U6 833 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 UBR7Q8N806 425 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 NUDT10Q8NFP7 164 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 NUDT11Q96G61 164 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 BDH2Q9BUT1 245 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 L2HGDHQ9H9P8 463 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 PCDH12Q9NPG4 1184 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 ACSS2Q9NR19 701 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 B3GALT1Q9Y5Z6 326 aa8□□□□□ -1.13
PPP4R3A-210ENST00000555718 MROH6A6NGR9 719 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 SCDO00767 359 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 B4GALT3O60512 393 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 SYN1P17600 705 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 HERVK_113P62684 666 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 DBPQ10586 325 aaPredicted RBP7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 UBXN11Q5T124 520 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 CPZQ66K79 652 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 STPG3Q8N7X2 389 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 SMC1BQ8NDV3 1235 aa7.99□□□□□ -1.13
PPP4R3A-210ENST00000555718 ATL2Q8NHH9 583 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms