RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 EMC4Q5J8M3 183 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 CNNM4Q6P4Q7 775 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 AMER2Q8N7J2 671 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 CHAC2Q8WUX2 184 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 LMF1Q96S06 567 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 CSRNP2Q9H175 543 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 HSPBP1Q9NZL4 362 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 FBXL7Q9UJT9 491 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 SLC4A7Q9Y6M7 1214 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 H7BY64 318 aa7.47□□□□□ -1.21
VRK1-205ENST00000555402 NARSO43776 548 aaKnown RBP7.47□□□□□ -1.21
VRK1-205ENST00000555402 PDE8AO60658 829 aa7.47□□□□□ -1.21
VRK1-205ENST00000555402 EFCAB14O75071 495 aa7.47□□□□□ -1.21
VRK1-205ENST00000555402 Q6ZUG5 572 aa7.47□□□□□ -1.21
VRK1-205ENST00000555402 PTPRN2Q92932 1015 aa7.47□□□□□ -1.21
VRK1-205ENST00000555402 SLC52A2Q9HAB3 445 aa7.47□□□□□ -1.21
VRK1-205ENST00000555402 MAGEC2Q9UBF1 373 aaPredicted RBP7.47□□□□□ -1.21
VRK1-205ENST00000555402 RBPJLQ9UBG7 517 aa7.47□□□□□ -1.21
VRK1-205ENST00000555402 PLSCR1O15162 318 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 SCG5P05408 212 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 VIL1P09327 827 aaKnown RBP7.46□□□□□ -1.22
VRK1-205ENST00000555402 C6orf222P0C671 652 aaPredicted RBP7.46□□□□□ -1.22
VRK1-205ENST00000555402 SDSP20132 328 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 AMPD3Q01432 767 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 KRT26Q7Z3Y9 468 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 BRAPQ7Z569 592 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 GIMAP8Q8ND71 665 aaPredicted RBP7.46□□□□□ -1.22
VRK1-205ENST00000555402 RCBTB1Q8NDN9 531 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 SLC7A14Q8TBB6 771 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 EDAQ92838 391 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 EXTL1Q92935 676 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 LRRC37BQ96QE4 947 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 TRIM8Q9BZR9 551 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 CAAP1Q9H8G2 361 aa7.46□□□□□ -1.22
VRK1-205ENST00000555402 MCM7P33993 719 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 SOX5P35711 763 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 KCNAB2Q13303 367 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 LSAMPQ13449 338 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 NTRK3Q16288 839 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 TRIM61Q5EBN2 209 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 SLC35F1Q5T1Q4 408 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 MAMDC2Q7Z304 686 aaPredicted RBP7.45□□□□□ -1.22
VRK1-205ENST00000555402 LRRTM3Q86VH5 581 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 TAX1BP1Q86VP1 789 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 THNSL2Q86YJ6 484 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 PPIL6Q8IXY8 311 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 UBR7Q8N806 425 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.45□□□□□ -1.22
VRK1-205ENST00000555402 MAGEB10Q96LZ2 347 aaPredicted RBP7.45□□□□□ -1.22
VRK1-205ENST00000555402 INTS7Q9NVH2 962 aaKnown RBP7.45□□□□□ -1.22
VRK1-205ENST00000555402 TRAF6Q9Y4K3 522 aa7.45□□□□□ -1.22
VRK1-205ENST00000555402 A0A087X0B3 334 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 MEFVO15553 781 aaPredicted RBP7.44□□□□□ -1.22
VRK1-205ENST00000555402 OPA1O60313 960 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 STAT3P40763 770 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 PTH1RQ03431 593 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 LSM12Q3MHD2 195 aaKnown RBP7.44□□□□□ -1.22
VRK1-205ENST00000555402 PHF19Q5T6S3 580 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 AGBL4Q5VU57 503 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 PROSER1Q86XN7 944 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 DCAF4Q8WV16 495 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 C1orf159Q96HA4 380 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 AJUBAQ96IF1 538 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 CHAMP1Q96JM3 812 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 TARS2Q9BW92 718 aaKnown RBP7.44□□□□□ -1.22
VRK1-205ENST00000555402 MYOTQ9UBF9 498 aa7.44□□□□□ -1.22
VRK1-205ENST00000555402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.43□□□□□ -1.22
VRK1-205ENST00000555402 AQP7O14520 342 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 DGKIO75912 1065 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 COMTP21964 271 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 CSF2RBP32927 897 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 NEK4P51957 841 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 DGCR2P98153 550 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 SMAD2Q15796 467 aaKnown RBP7.43□□□□□ -1.22
VRK1-205ENST00000555402 FGD2Q7Z6J4 655 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 DTX3Q8N9I9 347 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 KREMEN2Q8NCW0 462 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 PHOSPHO1Q8TCT1 267 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 SMOC1Q9H4F8 434 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 TRIM39Q9HCM9 518 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 DLL4Q9NR61 685 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 MAPRE3Q9UPY8 281 aa7.43□□□□□ -1.22
VRK1-205ENST00000555402 TNPO3Q9Y5L0 923 aaKnown RBP7.43□□□□□ -1.22
VRK1-205ENST00000555402 KCNQ2O43526 872 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 RAB11FIP3O75154 756 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 DNAJC8O75937 253 aaPredicted RBP7.42□□□□□ -1.22
VRK1-205ENST00000555402 KNG1P01042 644 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 CHGBP05060 677 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 FLT3P36888 993 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 DENND5AQ6IQ26 1287 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 STYK1Q6J9G0 422 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 KCNT2Q6UVM3 1135 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 GPR155Q7Z3F1 870 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 MTDHQ86UE4 582 aaKnown RBP7.42□□□□□ -1.22
VRK1-205ENST00000555402 GSTCDQ8NEC7 633 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 NEIL1Q96FI4 390 aaPredicted RBP7.42□□□□□ -1.22
VRK1-205ENST00000555402 CLDND1Q9NY35 253 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 PCDHA2Q9Y5H9 948 aa7.42□□□□□ -1.22
VRK1-205ENST00000555402 GSG1L2A8MUP6 293 aa7.41□□□□□ -1.22
VRK1-205ENST00000555402 RASGRP1O95267 797 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms