RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CLIC6Q96NY7 704 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 LXNQ9BS40 222 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 NIFKQ9BYG3 293 aaKnown RBP14.22□□□□□ -0.13
SYNE2-219ENST00000555323 NRBP2Q9NSY0 501 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 NRCAMQ92823 1304 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 PP2D1A8MPX8 630 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 NCLP19338 710 aaKnown RBP14.21□□□□□ -0.13
SYNE2-219ENST00000555323 UBA7P41226 1012 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 PSMC6P62333 389 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 ADAM17P78536 824 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 CTTNQ14247 550 aaKnown RBP14.21□□□□□ -0.13
SYNE2-219ENST00000555323 ECM1Q16610 540 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 TPH2Q8IWU9 490 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 VTI1AQ96AJ9 217 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 FAM167AQ96KS9 214 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 GTF2IRD1Q9UHL9 959 aa14.21□□□□□ -0.13
SYNE2-219ENST00000555323 MYH15Q9Y2K3 1946 aa14.21□□□□□ -0.14
SYNE2-219ENST00000555323 RRN3P2A6NIE6 340 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 OATP04181 439 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 INSRRP14616 1297 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 MARK3P27448 753 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 CCT6AP40227 531 aaKnown RBP14.2□□□□□ -0.14
SYNE2-219ENST00000555323 ME1P48163 572 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 SOX10P56693 466 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 CYP4A11Q02928 519 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 TARBP2Q15633 366 aaKnown RBP14.2□□□□□ -0.14
SYNE2-219ENST00000555323 SHC4Q6S5L8 630 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 ANO5Q75V66 913 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 OTUD6AQ7L8S5 288 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 ANKRD33Q7Z3H0 272 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 SNX29Q8TEQ0 813 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 EPSTI1Q96J88 318 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 TOX2Q96NM4 488 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 NACC1Q96RE7 527 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 CEP89Q96ST8 783 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 ANKEF1Q9NU02 776 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 HDAC6Q9UBN7 1215 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 PPME1Q9Y570 386 aa14.2□□□□□ -0.14
SYNE2-219ENST00000555323 KDM3AQ9Y4C1 1321 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 ZBTB42B2RXF5 422 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 SMIM10L2AP0DMW4 78 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 SMIM10L2BP0DMW5 78 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 GNAT1P11488 350 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 CMA1P23946 247 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 YWHABP31946 246 aaKnown RBP14.19□□□□□ -0.14
SYNE2-219ENST00000555323 PRKCEQ02156 737 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 GRB10Q13322 594 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 HIC1Q14526 733 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 ZNF484Q5JVG2 852 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 SPECC1Q5M775 1068 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 CABP7Q86V35 215 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 CKAP2LQ8IYA6 745 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 TMEM87AQ8NBN3 555 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 SYMPKQ92797 1274 aaKnown RBP14.19□□□□□ -0.14
SYNE2-219ENST00000555323 PNMA5Q96PV4 448 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 NT5C3AQ9H0P0 336 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 GDPD2Q9HCC8 539 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 COL1A2P08123 1366 aa14.19□□□□□ -0.14
SYNE2-219ENST00000555323 MROH7Q68CQ1 1323 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 FAM237AA0A1B0GTK4 181 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 A0A1W2PQ27 194 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 A0A1W2PQ64 194 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 A0A1W2PQD8 194 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 MBLAC1A4D2B0 266 aaPredicted RBP14.18□□□□□ -0.14
SYNE2-219ENST00000555323 DDX11L8A8MPP1 907 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 ZBTB39O15060 712 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 CD4P01730 458 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 PPFIA1Q13136 1202 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 GRIK4Q16099 956 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 CSPP1Q1MSJ5 1256 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 TMEM119Q4V9L6 283 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 MARCH8Q5T0T0 291 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 RESP18Q5W5W9 173 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 FAM126BQ8IXS8 530 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 CALML4Q96GE6 196 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 SETD4Q9NVD3 440 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 CCDC39Q9UFE4 941 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 DBR1Q9UK59 544 aaKnown RBP14.18□□□□□ -0.14
SYNE2-219ENST00000555323 KIAA1024Q9UPX6 916 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
SYNE2-219ENST00000555323 TCHHQ07283 1943 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 C17orf102A2RUQ5 167 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 TXLNAP40222 546 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 RARRES1P49788 294 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 RGS19P49795 217 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 LRRC26Q2I0M4 334 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
SYNE2-219ENST00000555323 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 LMBR1Q8WVP7 490 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 CTAGE1Q96RT6 745 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 CYP26B1Q9NR63 512 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 DDX19AQ9NUU7 478 aaKnown RBP14.17□□□□□ -0.14
SYNE2-219ENST00000555323 DNM3Q9UQ16 869 aa14.17□□□□□ -0.14
SYNE2-219ENST00000555323 IGKV6-21A0A0C4DH24 114 aa14.16□□□□□ -0.14
SYNE2-219ENST00000555323 MAGEB2O15479 319 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms