RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SOX1O00570 391 aaPredicted RBP13.63□□□□□ -0.23
SRP54-206ENST00000555317 TBX3O15119 743 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 EDIL3O43854 480 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 NEMFO60524 1076 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 GJB2P29033 226 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 CALCRLQ16602 461 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 TRIM71Q2Q1W2 868 aaKnown RBP13.63□□□□□ -0.23
SRP54-206ENST00000555317 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
SRP54-206ENST00000555317 ZNF484Q5JVG2 852 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 MCTP1Q6DN14 999 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
SRP54-206ENST00000555317 WNT8BQ93098 351 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 FAM49AQ9H0Q0 323 aaPredicted RBP13.63□□□□□ -0.23
SRP54-206ENST00000555317 CEP131Q9UPN4 1083 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 MAFBQ9Y5Q3 323 aaPredicted RBP13.63□□□□□ -0.23
SRP54-206ENST00000555317 SLC4A7Q9Y6M7 1214 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 SZT2Q5T011 3432 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 IGSF9BQ9UPX0 1349 aa13.63□□□□□ -0.23
SRP54-206ENST00000555317 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.62□□□□□ -0.23
SRP54-206ENST00000555317 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.62□□□□□ -0.23
SRP54-206ENST00000555317 MBLAC1A4D2B0 266 aaPredicted RBP13.62□□□□□ -0.23
SRP54-206ENST00000555317 KCNJ6P48051 423 aa13.62□□□□□ -0.23
SRP54-206ENST00000555317 SMAD3P84022 425 aaKnown RBP13.62□□□□□ -0.23
SRP54-206ENST00000555317 PRKCEQ02156 737 aa13.62□□□□□ -0.23
SRP54-206ENST00000555317 RUFY4Q6ZNE9 571 aa13.62□□□□□ -0.23
SRP54-206ENST00000555317 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
SRP54-206ENST00000555317 TRAPPC12Q8WVT3 735 aa13.62□□□□□ -0.23
SRP54-206ENST00000555317 KCNMB3Q9NPA1 279 aa13.62□□□□□ -0.23
SRP54-206ENST00000555317 NRBP2Q9NSY0 501 aa13.62□□□□□ -0.23
SRP54-206ENST00000555317 EVPLQ92817 2033 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 DKC1O60832 514 aaKnown RBP eCLIP13.61□□□□□ -0.23
SRP54-206ENST00000555317 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 OATP04181 439 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 ADAM17P78536 824 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 PPP2R5CQ13362 524 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 IER5Q5VY09 327 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 NCAPH2Q6IBW4 605 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 CNKSR3Q6P9H4 555 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 MTHFD1LQ6UB35 978 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 DNAJB3Q8WWF6 145 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
SRP54-206ENST00000555317 NBNO60934 754 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 EFCAB14O75071 495 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 CXCL10P02778 98 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 KLRC1P26715 233 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 MCM7P33993 719 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 TRAPPC10P48553 1259 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 MRPS6P82932 125 aaKnown RBP13.6□□□□□ -0.23
SRP54-206ENST00000555317 ORC2Q13416 577 aaPredicted RBP13.6□□□□□ -0.23
SRP54-206ENST00000555317 MYO9BQ13459 2157 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 IKBKEQ14164 716 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 MARCH8Q5T0T0 291 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 ZNF697Q5TEC3 545 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 RPAINQ86UA6 219 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 METTL13Q8N6R0 699 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 BANK1Q8NDB2 785 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 SEPT8Q92599 483 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 CXXC1Q9P0U4 656 aaPredicted RBP13.6□□□□□ -0.23
SRP54-206ENST00000555317 SEPT9Q9UHD8 586 aaPredicted RBP13.6□□□□□ -0.23
SRP54-206ENST00000555317 MSRAQ9UJ68 235 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 VAV3Q9UKW4 847 aa13.6□□□□□ -0.23
SRP54-206ENST00000555317 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 MAGEB2O15479 319 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 ATP2A2P16615 1042 aaKnown RBP13.59□□□□□ -0.23
SRP54-206ENST00000555317 TMOD1P28289 359 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 PSMC5P62195 406 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 RAB30Q15771 203 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 UGCGQ16739 394 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 XKR3Q5GH77 459 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 TTC38Q5R3I4 469 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 RASIP1Q5U651 963 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 NME8Q8N427 588 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 HAS1Q92839 578 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 ZBTB10Q96DT7 871 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 SLC9A7Q96T83 725 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
SRP54-206ENST00000555317 ABHD14A-ACY1A0A1B0GW23 586 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 ATP4AP20648 1035 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 PDCP20941 246 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.24
SRP54-206ENST00000555317 TXKP42681 527 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 QARSP47897 775 aaKnown RBP13.58□□□□□ -0.24
SRP54-206ENST00000555317 TBC1D8BQ0IIM8 1120 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 MBTPS1Q14703 1052 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 ZNF174Q15697 407 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 TMEM266Q2M3C6 531 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 FAM26DQ5JW98 314 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 LARP1BQ659C4 914 aaKnown RBP13.58□□□□□ -0.24
SRP54-206ENST00000555317 TRAF7Q6Q0C0 670 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 DEFB123Q8N688 67 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 APBB2Q92870 758 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 CCDC43Q96MW1 224 aaKnown RBP13.58□□□□□ -0.24
SRP54-206ENST00000555317 IFIH1Q9BYX4 1025 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms