RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 IMPACTQ9P2X3 320 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 ZBTB12Q9Y330 459 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 ZMYM6O95789 1325 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 ITSN2Q9NZM3 1697 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 USP17L12C9JPN9 530 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 USP17L21D6R901 530 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 SPAG7O75391 227 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 A1BGP04217 495 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 SLC16A2P36021 539 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PCYT1AP49585 367 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 ACAD11Q709F0 780 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 CRLF3Q8IUI8 442 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 CEP170P1Q96L14 293 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 DFFAO00273 331 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 PSAPP07602 524 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ZFXP17010 805 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 POU5F1BQ06416 359 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 C16orf72Q14CZ0 275 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 CEP78Q5JTW2 689 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 TADA2BQ86TJ2 420 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ST13P4Q8IZP2 240 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 TTLL11Q8NHH1 800 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 SLC10A4Q96EP9 437 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 DDX28Q9NUL7 540 aaKnown RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 KLRF2D3W0D1 207 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 GCKRQ14397 625 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 TSPYL6Q8N831 410 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 PNMA1Q8ND90 353 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 VPS39Q96JC1 886 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 RUBCNLQ9H714 662 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 NGRNQ9NPE2 291 aaKnown RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 KLHL8Q9P2G9 620 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ATF5Q9Y2D1 282 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ERBB3P21860 1342 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 NESP48681 1621 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ASMTLO95671 621 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 NKX1-1Q15270 411 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ADCK5Q3MIX3 580 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 MMS22LQ6ZRQ5 1243 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 PPP1R36Q96LQ0 422 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 YY1AP1Q9H869 796 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ADD3Q9UEY8 706 aaKnown RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 NNMTP40261 264 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 PWP1Q13610 501 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ARHGAP45Q92619 1136 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 DCUN1D1Q96GG9 259 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 CLIC6Q96NY7 704 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 COPG1Q9Y678 874 aaKnown RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ARAP1Q96P48 1450 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 GUCA1CO95843 209 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 GTF2H3Q13889 308 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 RGS9BPQ6ZS82 235 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 CUL1Q13616 776 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 SUPT20HL1Q3ZLR7 823 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ANKRD40Q6AI12 368 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 RRM2BQ7LG56 351 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 TTC8Q8TAM2 541 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 NDE1Q9NXR1 346 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 GOLGA8IPA6NC78 632 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 GOLGA8JA6NMD2 632 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 KCNA2P16389 499 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 SYMPKQ92797 1274 aaKnown RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 SNX21Q969T3 373 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 SPON2Q9BUD6 331 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ZFYVE1Q9HBF4 777 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 SNX5Q9Y5X3 404 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 KDM5BQ9UGL1 1544 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 KRT4P19013 534 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 LRRC41Q15345 812 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 CCDC51Q96ER9 411 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 PRG3Q9Y2Y8 225 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 MRFAP1Q9Y605 127 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 NR2F2P24468 414 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 RPS8P62241 208 aaKnown RBP7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ALFQ53S48 1182 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 ARMCX2Q7L311 632 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 MFN1Q8IWA4 741 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 SNX31Q8N9S9 440 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 GTF2A1LQ9UNN4 478 aa7.37□□□□□ -1.23
SYNE2-216ENST00000555002 TADA3O75528 432 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SCG2P13521 617 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 TMPRSS15P98073 1019 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 ARMC6Q6NXE6 501 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 CCHCR1Q8TD31 782 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SUCLG2Q96I99 432 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 ZNF341Q9BYN7 854 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 TMEM161AQ9NX61 479 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 E7EWF7 191 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 ENC1O14682 589 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 GTPBP6O43824 516 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 KRT17Q04695 432 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 CNOT6LQ96LI5 555 aaKnown RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 PPP2R2CQ9Y2T4 447 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 KRT7P08729 469 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 GSPT1P15170 499 aaKnown RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 EFTUD2Q15029 972 aaKnown RBP eCLIP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 KCNV2Q8TDN2 545 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 PYROXD1Q8WU10 500 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms