RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ZNF772	Q68DY9	489 aa	Predicted RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	MAMDC2	Q7Z304	686 aa	Predicted RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	MTDH	Q86UE4	582 aa	Known RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	MIB1	Q86YT6	1006 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	RBM12B	Q8IXT5	1001 aa	Known RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	ARRDC4	Q8NCT1	418 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	MRFAP1L1	Q96HT8	127 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	NOX5	Q96PH1	765 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	USP35	Q9P2H5	1018 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	ZNF652	Q9Y2D9	606 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	PCDHB4	Q9Y5E5	795 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	SETD1A	O15047	1707 aa	Known RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	XRN1	Q8IZH2	1706 aa	Known RBP	7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	CLTCL1	P53675	1640 aa		7.38	□□□□□ -1.23
PSMC6-208	ENST00000554956	C1orf167	Q5SNV9	1468 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	PNPLA6	Q8IY17	1366 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	TCRBV5S2	A0A599	114 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	TADA3	O75528	432 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	AFF3	P51826	1226 aa	Known RBP	7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	SPOCD1	Q6ZMY3	1216 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	ETV3L	Q6ZN32	361 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	DPH6	Q7L8W6	267 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	ZSWIM2	Q8NEG5	633 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	CPA5	Q8WXQ8	436 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	LRRC59	Q96AG4	307 aa	Known RBP	7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	DDX11	Q96FC9	970 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	SLC52A2	Q9HAB3	445 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	MYOT	Q9UBF9	498 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	NDOR1	Q9UHB4	597 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	PCDHA9	Q9Y5H5	950 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	PCDHA8	Q9Y5H6	950 aa		7.37	□□□□□ -1.23
PSMC6-208	ENST00000554956	ADGRF5	Q8IZF2	1346 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	AQP7	O14520	342 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	NKRF	O15226	690 aa	Known RBP eCLIP	7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	GABRE	P78334	506 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	SQSTM1	Q13501	440 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	CHRNA2	Q15822	529 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	OTOP3	Q7RTS5	596 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	FAM126B	Q8IXS8	530 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	SLC7A14	Q8TBB6	771 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	FNIP1	Q8TF40	1166 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	ALG1	Q9BT22	464 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	PMF1-BGLAP	U3KQ54	211 aa		7.36	□□□□□ -1.23
PSMC6-208	ENST00000554956	SLC27A2	O14975	620 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	CRTAM	O95727	393 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	GNAT1	P11488	350 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	GUCY1A3	Q02108	690 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	TCERG1L	Q5VWI1	586 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	CD300LD	Q6UXZ3	194 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	STK32C	Q86UX6	486 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	ADGRG2	Q8IZP9	1017 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	SH3TC2	Q8TF17	1288 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	SLC6A20	Q9NP91	592 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	HFM1	A2PYH4	1435 aa		7.35	□□□□□ -1.23
PSMC6-208	ENST00000554956	FAM47E-STBD1	D6RA91	191 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	RASGRP1	O95267	797 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	LTF	P02788	710 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	SRGAP2C	P0DJJ0	459 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	CYP2C8	P10632	490 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	HTRA3	P83110	453 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	PAK1	Q13153	545 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	CR1L	Q2VPA4	569 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	RGL3	Q3MIN7	710 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	VWA3B	Q502W6	1294 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	PCDH19	Q8TAB3	1148 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	GORASP1	Q9BQQ3	440 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	YIPF4	Q9BSR8	244 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	SMOC1	Q9H4F8	434 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	ASH2L	Q9UBL3	628 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	ADAMTS20	P59510	1910 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	PTCH1	Q13635	1447 aa		7.34	□□□□□ -1.23
PSMC6-208	ENST00000554956	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	PLEKHH1	Q9ULM0	1364 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	RPGRIP1L	Q68CZ1	1315 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	SPHKAP	Q2M3C7	1700 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	SHPRH	Q149N8	1683 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956		A0A1B0GTL3	188 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	ARVCF	O00192	962 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	KRIT1	O00522	736 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	FFAR3	O14843	346 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	GRIN1	Q05586	938 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	SMAD4	Q13485	552 aa	Known RBP	7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	HABP4	Q5JVS0	413 aa	Known RBP	7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	TMEM151B	Q8IW70	566 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	GSTCD	Q8NEC7	633 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	ZNF526	Q8TF50	670 aa	Predicted RBP	7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	STK26	Q9P289	416 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	SFMBT1	Q9UHJ3	866 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	TELO2	Q9Y4R8	837 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	RGS12	O14924	1447 aa		7.33	□□□□□ -1.24
PSMC6-208	ENST00000554956	TCRBV5S4A2T	A0A5A2	114 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	TRIM13	O60858	407 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	PYGM	P11217	842 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	RBM6	P78332	1123 aa	Known RBP	7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	DLX2	Q07687	328 aa	Predicted RBP	7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	SPIRE1	Q08AE8	756 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	TUSC3	Q13454	348 aa		7.32	□□□□□ -1.24
PSMC6-208	ENST00000554956	BRAP	Q7Z569	592 aa		7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms