RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 UBTFL1P0CB47 393 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 RARBP10826 455 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 ADORA2AP29274 412 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 PPIGQ13427 754 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 COG2Q14746 738 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 CCDC85BQ15834 202 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 CCDC184Q52MB2 194 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 GORABQ5T7V8 394 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 B4GALNT3Q6L9W6 998 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 SEZ6L2Q6UXD5 910 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 CCDC129Q6ZRS4 1044 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 ANKRD33Q7Z3H0 272 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 MAPKAPK5Q8IW41 473 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 ABRAQ8N0Z2 381 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 SLC44A5Q8NCS7 719 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 GLIS3Q8NEA6 775 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 SHCBP1Q8NEM2 672 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 TGFBRAP1Q8WUH2 860 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 CCDC74AQ96AQ1 378 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 TBC1D32Q96NH3 1257 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 NEUROD6Q96NK8 337 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 CITED4Q96RK1 184 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 FEZ1Q99689 392 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 MOV10L1Q9BXT6 1211 aaKnown RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 NIF3L1Q9GZT8 377 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 SEMA6CQ9H3T2 930 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 PRDM12Q9H4Q4 367 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 MROH8Q9H579 483 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 ACSS3Q9H6R3 686 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 DNAJC18Q9H819 358 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 GOLGA2P5Q9HBQ8 144 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 FAM105AQ9NUU6 356 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 AATFQ9NY61 560 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 PA2G4Q9UQ80 394 aaKnown RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 MGAMO43451 1857 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 NEFLP07196 543 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 UQCRFS1P1P0C7P4 283 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 VCAM1P19320 739 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 ERCC3P19447 782 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 FAAP100Q0VG06 881 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 TFCP2Q12800 502 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 RAB30Q15771 203 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 ZYXQ15942 572 aaKnown RBP5.88□□□□□ -1.47
ATXN3-229ENST00000554672 SHROOM1Q2M3G4 852 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-229ENST00000554672 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 TMEM240Q5SV17 173 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 RASIP1Q5U651 963 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 NAA16Q6N069 864 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-229ENST00000554672 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 DYMQ7RTS9 669 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 ABI1Q8IZP0 508 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 WDR89Q96FK6 387 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-229ENST00000554672 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-229ENST00000554672 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 SPATC1LQ9H0A9 340 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-229ENST00000554672 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 XPNPEP3Q9NQH7 507 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 C1GALT1Q9NS00 363 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 CCDC39Q9UFE4 941 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 PPP1R9AQ9ULJ8 1098 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 FLT1P17948 1338 aa5.88□□□□□ -1.47
ATXN3-229ENST00000554672 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 A0A1W2PQ45 241 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-229ENST00000554672 A0A1W2PQY0 241 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 PAX4O43316 350 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 PGK1P00558 417 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 PRNPP04156 253 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 FCER1AP12319 257 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 RAB6AP20340 208 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 COL19A1Q14993 1142 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 CPSF6Q16630 551 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATXN3-229ENST00000554672 ABCB5Q2M3G0 1257 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-229ENST00000554672 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 TTC6Q86TZ1 520 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 TMEM199Q8N511 208 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 RETREG2Q8NC44 543 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 GIMAP7Q8NHV1 300 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 EPS8L3Q8TE67 593 aaKnown RBP5.87□□□□□ -1.47
ATXN3-229ENST00000554672 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 MAML3Q96JK9 1138 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 DNAJC25Q9H1X3 360 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 EPHX3Q9H6B9 360 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 SLC28A3Q9HAS3 691 aa5.87□□□□□ -1.47
ATXN3-229ENST00000554672 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms