RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SYNE3Q6ZMZ3 975 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 MMS22LQ6ZRQ5 1243 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 CAPN12Q6ZSI9 719 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 FAM47EQ6ZV65 393 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 VPS37DQ86XT2 251 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 ZNF280CQ8ND82 737 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 LILRB1Q8NHL6 650 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 GIMAP1Q8WWP7 306 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 DPF3Q92784 378 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 RELTQ969Z4 430 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 THAP11Q96EK4 314 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 NOL10Q9BSC4 688 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 PRM3Q9NNZ6 103 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 C6orf203Q9P0P8 240 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 FBXO10Q9UK96 956 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 RCAN3Q9UKA8 241 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 TPCN1Q9ULQ1 816 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 PFASO15067 1338 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 A0A0B4J203 849 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 MOXD2PA6NHM9 499 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SLC15A5A6NIM6 579 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L5A8MUK1 530 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 LETM1O95202 739 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SETSIPP0DME0 302 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CLCN1P35523 988 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 KRT20P35900 424 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 MRE11P49959 708 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ARHGAP4P98171 946 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SLFN5Q08AF3 891 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 MRPL28Q13084 256 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TMED1Q13445 227 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 MVPQ14764 893 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 FAM133BQ5BKY9 247 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 GPATCH4Q5T3I0 446 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 IRGCQ6NXR0 463 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 FIP1L1Q6UN15 594 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 EEPD1Q7L9B9 569 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DAAM2Q86T65 1068 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ZNF354CQ86Y25 554 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 FOXP4Q8IVH2 680 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ZFPM1Q8IX07 1006 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CKAP2LQ8IYA6 745 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ABRAQ8N0Z2 381 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 VPS52Q8N1B4 723 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SHCBP1Q8NEM2 672 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 EPS8L1Q8TE68 723 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ZNF384Q8TF68 577 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 NCAPGQ9BPX3 1015 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SLC39A3Q9BRY0 314 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DNAI2Q9GZS0 605 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CSRNP2Q9H175 543 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TMEM134Q9H6X4 195 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 PLEKHA5Q9HAU0 1116 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 FANCFQ9NPI8 374 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DDX4Q9NQI0 724 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DONSONQ9NYP3 566 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CFAP45Q9UL16 551 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ZBED9Q6R2W3 1325 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DDTLA6NHG4 134 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 STXBP3O00186 592 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DNM1LO00429 736 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TNPO2O14787 897 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 MAN1A2O60476 641 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CNMDO75829 334 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 GFPT2O94808 682 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TFRCP02786 760 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 UQCRFS1P1P0C7P4 283 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ATF4P18848 351 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 PSMA3P25788 255 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 PRDX5P30044 214 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 BACE1P56817 501 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 LMNB2Q03252 620 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 NSUN2Q08J23 767 aaKnown RBP eCLIP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 MAP7D1Q3KQU3 841 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TUBB8Q3ZCM7 444 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 PPP2R2DQ66LE6 453 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CCDC102BQ68D86 513 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 FAAH2Q6GMR7 532 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TATDN1Q6P1N9 297 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CYP26C1Q6V0L0 522 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 RSRC2Q7L4I2 434 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TRIM74Q86UV6 250 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 TRIM73Q86UV7 250 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ZSCAN29Q8IWY8 852 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DCLK2Q8N568 766 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 GPR161Q8N6U8 529 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 APPBP2Q92624 585 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SYAP1Q96A49 352 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 NSUN4Q96CB9 384 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ZMAT2Q96NC0 199 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DEPDC7Q96QD5 511 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 DNAJC7Q99615 494 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 MKNK1Q9BUB5 465 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 C2orf49Q9BVC5 232 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 API5Q9BZZ5 524 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ASCC2Q9H1I8 757 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SMYD2Q9NRG4 433 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SEL1LQ9UBV2 794 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 SEPT3Q9UH03 358 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms