RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 FBXO47Q5MNV8 452 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 VARS2Q5ST30 1063 aaKnown RBP19.57■□□□□ 0.72
NEK9-204ENST00000554258 TSHZ1Q6ZSZ6 1077 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 TCF25Q9BQ70 676 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 CYP26B1Q9NR63 512 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 PXMP2Q9NR77 195 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 LRFN2Q9ULH4 789 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 DUSP12Q9UNI6 340 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 USTQ9Y2C2 406 aa19.57■□□□□ 0.72
NEK9-204ENST00000554258 RANBP6O60518 1105 aaKnown RBP19.56■□□□□ 0.72
NEK9-204ENST00000554258 SCG2P13521 617 aa19.56■□□□□ 0.72
NEK9-204ENST00000554258 SDSP20132 328 aa19.56■□□□□ 0.72
NEK9-204ENST00000554258 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
NEK9-204ENST00000554258 MGAT3Q09327 533 aa19.56■□□□□ 0.72
NEK9-204ENST00000554258 RSPH3Q86UC2 560 aa19.56■□□□□ 0.72
NEK9-204ENST00000554258 RTN4RL1Q86UN2 441 aaPredicted RBP19.56■□□□□ 0.72
NEK9-204ENST00000554258 MCF2L2Q86YR7 1114 aa19.56■□□□□ 0.72
NEK9-204ENST00000554258 FTHL17Q9BXU8 183 aa19.56■□□□□ 0.72
NEK9-204ENST00000554258 NAPBQ9H115 298 aa19.56■□□□□ 0.72
NEK9-204ENST00000554258 HIDE1A8MVS5 230 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 NOP56O00567 594 aaKnown RBP19.55■□□□□ 0.72
NEK9-204ENST00000554258 MYCLP12524 364 aaPredicted RBP19.55■□□□□ 0.72
NEK9-204ENST00000554258 IBSPP21815 317 aaPredicted RBP19.55■□□□□ 0.72
NEK9-204ENST00000554258 CD52P31358 61 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 NOVP48745 357 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 ADAM17P78536 824 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 TBC1D8BQ0IIM8 1120 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 TAF2Q6P1X5 1199 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 RUFY4Q6ZNE9 571 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 USP26Q9BXU7 913 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 DOCK5Q9H7D0 1870 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 AGO3Q9H9G7 860 aaKnown RBP19.55■□□□□ 0.72
NEK9-204ENST00000554258 PUF60Q9UHX1 559 aaKnown RBP19.55■□□□□ 0.72
NEK9-204ENST00000554258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.55■□□□□ 0.72
NEK9-204ENST00000554258 HCFC2Q9Y5Z7 792 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 ZZEF1O43149 2961 aa19.55■□□□□ 0.72
NEK9-204ENST00000554258 ABCB11O95342 1321 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 DENND4AQ7Z401 1863 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 TRIM6-TRIM34B2RNG4 842 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 EOMESO95936 686 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 ZFYP08048 801 aaPredicted RBP19.54■□□□□ 0.72
NEK9-204ENST00000554258 PDHBP11177 359 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 TOP1P11387 765 aaKnown RBP19.54■□□□□ 0.72
NEK9-204ENST00000554258 SP2Q02086 613 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 SPECC1Q5M775 1068 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 RARS2Q5T160 578 aaKnown RBP19.54■□□□□ 0.72
NEK9-204ENST00000554258 NGRNQ9NPE2 291 aaKnown RBP19.54■□□□□ 0.72
NEK9-204ENST00000554258 LZTS1Q9Y250 596 aa19.54■□□□□ 0.72
NEK9-204ENST00000554258 M0R2C6 588 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 RNF113AO15541 343 aaKnown RBP19.53■□□□□ 0.72
NEK9-204ENST00000554258 HSPD1P10809 573 aaKnown RBP19.53■□□□□ 0.72
NEK9-204ENST00000554258 ZNF543Q08ER8 600 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 ATAT1Q5SQI0 421 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 KIAA1841Q6NSI8 718 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 COLGALT1Q8NBJ5 622 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 SECISBP2LQ93073 1101 aaKnown RBP19.53■□□□□ 0.72
NEK9-204ENST00000554258 RILPL2Q969X0 211 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 ACSF2Q96CM8 615 aaPredicted RBP19.53■□□□□ 0.72
NEK9-204ENST00000554258 TMEM47Q9BQJ4 181 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 ZNF215Q9UL58 517 aaPredicted RBP19.53■□□□□ 0.72
NEK9-204ENST00000554258 CDY2AQ9Y6F7 541 aa19.53■□□□□ 0.72
NEK9-204ENST00000554258 TGFB3P10600 412 aa19.52■□□□□ 0.72
NEK9-204ENST00000554258 PPM1JQ5JR12 505 aa19.52■□□□□ 0.72
NEK9-204ENST00000554258 XRRA1Q6P2D8 792 aa19.52■□□□□ 0.72
NEK9-204ENST00000554258 TRIM50Q86XT4 487 aa19.52■□□□□ 0.72
NEK9-204ENST00000554258 C1orf210Q8IVY1 113 aa19.52■□□□□ 0.72
NEK9-204ENST00000554258 MRPS27Q92552 414 aaKnown RBP19.52■□□□□ 0.72
NEK9-204ENST00000554258 NRCAMQ92823 1304 aa19.51■□□□□ 0.71
NEK9-204ENST00000554258 TBKBP1A7MCY6 615 aa19.51■□□□□ 0.71
NEK9-204ENST00000554258 DCNP07585 359 aaKnown RBP19.51■□□□□ 0.71
NEK9-204ENST00000554258 CTDSPL2Q05D32 466 aa19.51■□□□□ 0.71
NEK9-204ENST00000554258 USP18Q9UMW8 372 aa19.51■□□□□ 0.71
NEK9-204ENST00000554258 FLNBO75369 2602 aaKnown RBP19.5■□□□□ 0.71
NEK9-204ENST00000554258 SPEGQ15772 3267 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 KRBA1A5PL33 1030 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 CFHP08603 1231 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 CDC37Q16543 378 aaPredicted RBP19.5■□□□□ 0.71
NEK9-204ENST00000554258 ZMYM1Q5SVZ6 1142 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 TMC7Q7Z402 723 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 C12orf76Q8N812 135 aaPredicted RBP19.5■□□□□ 0.71
NEK9-204ENST00000554258 DNAJB3Q8WWF6 145 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 PDCD2LQ9BRP1 358 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 TBC1D17Q9HA65 648 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 KCNK12Q9HB15 430 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 TYW1Q9NV66 732 aaKnown RBP19.5■□□□□ 0.71
NEK9-204ENST00000554258 HCSTQ9UBK5 93 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 WNT16Q9UBV4 365 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 PCDHB7Q9Y5E2 793 aa19.5■□□□□ 0.71
NEK9-204ENST00000554258 NARSO43776 548 aaKnown RBP19.49■□□□□ 0.71
NEK9-204ENST00000554258 CFBP00751 764 aa19.49■□□□□ 0.71
NEK9-204ENST00000554258 LAG3P18627 525 aa19.49■□□□□ 0.71
NEK9-204ENST00000554258 MRPS6P82932 125 aaKnown RBP19.49■□□□□ 0.71
NEK9-204ENST00000554258 PLCB3Q01970 1234 aa19.49■□□□□ 0.71
NEK9-204ENST00000554258 UTP14CQ5TAP6 766 aaKnown RBP19.49■□□□□ 0.71
NEK9-204ENST00000554258 OTOP3Q7RTS5 596 aa19.49■□□□□ 0.71
NEK9-204ENST00000554258 GPKOWQ92917 476 aaPredicted RBP eCLIP19.49■□□□□ 0.71
NEK9-204ENST00000554258 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
NEK9-204ENST00000554258 HIP1O00291 1037 aa19.48■□□□□ 0.71
NEK9-204ENST00000554258 SPTLC1O15269 473 aa19.48■□□□□ 0.71
NEK9-204ENST00000554258 CHMLP26374 656 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms