RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 PTGS1P23219 599 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 CDK8P49336 464 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 IDH3AP50213 366 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 CNTN2Q02246 1040 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 MBTPS1Q14703 1052 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 FAM133AQ8N9E0 248 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 RETREG2Q8NC44 543 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 SDR42E1Q8WUS8 393 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 NACC1Q96RE7 527 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 TGS1Q96RS0 853 aaKnown RBP8.22□□□□□ -1.09
ATXN3-224ENST00000554040 CCDC8Q9H0W5 538 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-224ENST00000554040 SLC38A10Q9HBR0 1119 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 RAVER2Q9HCJ3 691 aaKnown RBP8.22□□□□□ -1.09
ATXN3-224ENST00000554040 PRKAG3Q9UGI9 489 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 MYH1P12882 1939 aa8.22□□□□□ -1.09
ATXN3-224ENST00000554040 MAP3K6O95382 1288 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 KCNJ6P48051 423 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 PLAURQ03405 335 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 ZP2Q05996 745 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 OS9Q13438 667 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-224ENST00000554040 SLC9C2Q5TAH2 1124 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 TAPT1Q6NXT6 567 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 FAM9BQ8IZU0 186 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 PRSS33Q8NF86 280 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.21□□□□□ -1.1
ATXN3-224ENST00000554040 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-224ENST00000554040 MYO19Q96H55 970 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 NUP88Q99567 741 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-224ENST00000554040 RAD9AQ99638 391 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 UPF3BQ9BZI7 483 aaKnown RBP8.21□□□□□ -1.1
ATXN3-224ENST00000554040 PDGFCQ9NRA1 345 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
ATXN3-224ENST00000554040 CTDP1Q9Y5B0 961 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-224ENST00000554040 FAM186AA6NE01 2351 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 TECTAO75443 2155 aa8.21□□□□□ -1.1
ATXN3-224ENST00000554040 C5orf42Q9H799 3197 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 MYO7AQ13402 2215 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 F5H6K3 240 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 H3BQ06 376 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-224ENST00000554040 SURF6O75683 361 aaKnown RBP8.2□□□□□ -1.1
ATXN3-224ENST00000554040 NDUFB10O96000 172 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 CT47B1P0C2W7 299 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-224ENST00000554040 PDE6AP16499 860 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 OAZ1P54368 228 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 WDR5P61964 334 aaKnown RBP8.2□□□□□ -1.1
ATXN3-224ENST00000554040 KLRC3Q07444 240 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 ZMYM1Q5SVZ6 1142 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 TMEM63BQ5T3F8 832 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 C12orf60Q5U649 245 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 C16orf86Q6ZW13 317 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 BMP8AQ7Z5Y6 402 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 TMCO2Q7Z6W1 182 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-224ENST00000554040 ADHFE1Q8IWW8 467 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 LCORLQ8N3X6 602 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 IFT43Q96FT9 208 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 PRRX2Q99811 253 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 LPIN3Q9BQK8 851 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 ATP8A2Q9NTI2 1148 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 MTUS1Q9ULD2 1270 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 LRFN2Q9ULH4 789 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 FAM50BQ9Y247 325 aa8.2□□□□□ -1.1
ATXN3-224ENST00000554040 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
ATXN3-224ENST00000554040 CACNA1GO43497 2377 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 TCRBV5S4A2TA0A5A2 114 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 LINC01553A4QN01 128 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 OPLAHO14841 1288 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 PRKAB2O43741 272 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 GJB5O95377 273 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 ATP8B2P98198 1209 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 PURAQ00577 322 aaKnown RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 TCF15Q12870 199 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 BFSP2Q13515 415 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 GPNMBQ14956 572 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 TTF1Q15361 905 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 PKN1Q16512 942 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 DUSP28Q4G0W2 176 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 HERC4Q5GLZ8 1057 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 NFRKBQ6P4R8 1299 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 KIAA1211Q6ZU35 1233 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 EEPD1Q7L9B9 569 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 FBXO16Q8IX29 292 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 FMR1NBQ8N0W7 255 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 SSH3Q8TE77 659 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 MRPL38Q96DV4 380 aaKnown RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 PNMA5Q96PV4 448 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 MTG1Q9BT17 334 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 ACAD9Q9H845 621 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 A1CFQ9NQ94 594 aaKnown RBP8.19□□□□□ -1.1
ATXN3-224ENST00000554040 NYAP2Q9P242 653 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 CTNNA3Q9UI47 895 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 FEM1BQ9UK73 627 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 ZNF532Q9HCE3 1301 aa8.19□□□□□ -1.1
ATXN3-224ENST00000554040 CACNA1BQ00975 2339 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 CYP2D7A0A087X1C5 515 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 C9orf172C9J069 976 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 BCAR3O75815 825 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms