RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 RBM26Q5T8P6 1007 aaKnown RBP9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 SYDE2Q5VT97 1194 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 CCDC121Q6ZUS5 278 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 FBXO11Q86XK2 927 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 FAM114A1Q8IWE2 563 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 MICAL1Q8TDZ2 1067 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 TATDN2Q93075 761 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 LENG9Q96B70 501 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 GMCL1Q96IK5 515 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 SELENOOQ9BVL4 669 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 COL4A5P29400 1685 aa9.9□□□□□ -0.82
AL049839.2-201ENST00000553947 FAM86B1E9PN63 330 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 RAD17O75943 681 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 SNUPNO95149 360 aaKnown RBP9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 FAM86B2P0C5J1 330 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 BMP3P12645 472 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 SPIRE1Q08AE8 756 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 MEA1Q16626 185 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 CCDC181Q5TID7 509 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 CC2D2BQ6DHV5 1058 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 GPIHBP1Q8IV16 184 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 CCDC50Q8IVM0 306 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 CYP2W1Q8TAV3 490 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 ACER1Q8TDN7 264 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 ERGIC2Q96RQ1 377 aa9.9□□□□□ -0.83
AL049839.2-201ENST00000553947 POTEFA5A3E0 1075 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 RCCD1A6NED2 376 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 TTC36A6NLP5 189 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 PLA2G4BP0C869 781 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 PSMC6P62333 389 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 TRAF1Q13077 416 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 VWA3BQ502W6 1294 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 KCTD16Q68DU8 428 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 POTEEQ6S8J3 1075 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 SLC30A10Q6XR72 485 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 SND1Q7KZF4 910 aaKnown RBP eCLIP9.89□□□□□ -0.837e-18■■■■■ 27.6
AL049839.2-201ENST00000553947 CCDC155Q8N6L0 562 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 SPDYE1Q8NFV5 336 aaPredicted RBP9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 VCPKMTQ9H867 229 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 PANK4Q9NVE7 773 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 OPA1O60313 960 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 PLEKP08567 350 aaPredicted RBP9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 PPARDQ03181 441 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 ZCWPW2Q504Y3 356 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 ARSHQ5FYA8 562 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 FKBP15Q5T1M5 1219 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 TBC1D5Q92609 795 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 GLT8D2Q9H1C3 349 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 NDST4Q9H3R1 872 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.89□□□□□ -0.831e-11■■■■□ 22.7
AL049839.2-201ENST00000553947 PRR12Q9ULL5 1215 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 GUCA1BQ9UMX6 200 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 SIK3Q9Y2K2 1263 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 PCDHA2Q9Y5H9 948 aa9.89□□□□□ -0.83
AL049839.2-201ENST00000553947 SPDYE2BA6NHP3 402 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 MEIS1O00470 390 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 PSMD14O00487 310 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 SPDYE6P0CI01 402 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 CYP11B2P19099 503 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 SLC8A1P32418 973 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 USP14P54578 494 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 ZBED6P86452 979 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 AP3B2Q13367 1082 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 CCDC70Q6NSX1 233 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 CYB5D1Q6P9G0 228 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 GPBP1Q86WP2 473 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 CATSPER3Q86XQ3 398 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 MYOCDQ8IZQ8 938 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 CAMKK2Q96RR4 588 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 FAM207AQ9NSI2 230 aaPredicted RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 GRIN2DO15399 1336 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 AGPSO00116 658 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 ENC1O14682 589 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 LRRC63Q05C16 580 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 ZC3H12AQ5D1E8 599 aaKnown RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 FAM26FQ5R3K3 315 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 BTNL9Q6UXG8 535 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 NELFCDQ8IXH7 590 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 NAP1L4Q99733 375 aaKnown RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 NUP58Q9BVL2 599 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 LRRC27Q9C0I9 530 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 NT5C3AQ9H0P0 336 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 BCAS3Q9H6U6 928 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 NHEJ1Q9H9Q4 299 aaPredicted RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 ZNF277Q9NRM2 450 aaPredicted RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 CNTNAP1P78357 1384 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 GOLGA8KD6RF30 607 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 BUB1BO60566 1050 aaPredicted RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 SLC12A3P55017 1021 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 CYP27A1Q02318 531 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 MAN2A1Q16706 1144 aa9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 RSBN1LQ6PCB5 846 aaPredicted RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 RPUSD2Q8IZ73 545 aaKnown RBP9.88□□□□□ -0.83
AL049839.2-201ENST00000553947 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms