RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 IRS1P35568 1242 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 NKX3-2P78367 333 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 FAM160A1Q05DH4 1040 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 AXDND1Q5T1B0 1012 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-208ENST00000553868 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
SHMT2-208ENST00000553868 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 RNF207Q6ZRF8 634 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 ARMCX2Q7L311 632 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
SHMT2-208ENST00000553868 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
SHMT2-208ENST00000553868 CYP3A7-CYP3A51PA0A087WV96 503 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 WNT7AO00755 349 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 MARCH6O60337 910 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 LETM1O95202 739 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-208ENST00000553868 CYP3A7P24462 503 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 CIITAP33076 1130 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 ZNF76P36508 570 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 LONP1P36776 959 aaKnown RBP16.28■□□□□ 0.2
SHMT2-208ENST00000553868 TNFAIP2Q03169 654 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 CALCRLQ16602 461 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 FSCN1Q16658 493 aaKnown RBP16.28■□□□□ 0.2
SHMT2-208ENST00000553868 TMEM63BQ5T3F8 832 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 CCDC183Q5T5S1 534 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 CACNA1HO95180 2353 aa16.28■□□□□ 0.2
SHMT2-208ENST00000553868 KINO60870 393 aaKnown RBP16.27■□□□□ 0.2
SHMT2-208ENST00000553868 CABYRO75952 493 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 TXLNAP40222 546 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 RPS6P62753 249 aaKnown RBP16.27■□□□□ 0.2
SHMT2-208ENST00000553868 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 RESP18Q5W5W9 173 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 ZNF467Q7Z7K2 595 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-208ENST00000553868 TLK2Q86UE8 772 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 C4orf32Q8N8J7 132 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-208ENST00000553868 CRYGNQ8WXF5 182 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 PYM1Q9BRP8 204 aaKnown RBP16.27■□□□□ 0.2
SHMT2-208ENST00000553868 RAB34Q9BZG1 259 aa16.27■□□□□ 0.2
SHMT2-208ENST00000553868 GNEQ9Y223 722 aaKnown RBP16.27■□□□□ 0.2
SHMT2-208ENST00000553868 CACNA1BQ00975 2339 aa16.27■□□□□ 0.19
SHMT2-208ENST00000553868 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 VWA3AA6NCI4 1184 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 TBX3O15119 743 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 DYNC1LI2O43237 492 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-208ENST00000553868 TDP2O95551 362 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 LIG1P18858 919 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 XRRA1Q6P2D8 792 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 EP400NLQ6ZTU2 488 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 SLFN12Q8IYM2 578 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 CCDC34Q96HJ3 373 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 AK8Q96MA6 479 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 MBOAT7Q96N66 472 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 CLIC6Q96NY7 704 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 CSRNP2Q9H175 543 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
SHMT2-208ENST00000553868 SIP14410 1827 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 PFKFB1P16118 471 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 SYKP43405 635 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 DEFB103AP81534 67 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 BAATQ14032 418 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-208ENST00000553868 PUS10Q3MIT2 529 aaKnown RBP16.25■□□□□ 0.19
SHMT2-208ENST00000553868 Q4G0T1 1027 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 SLC30A10Q6XR72 485 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.25■□□□□ 0.19
SHMT2-208ENST00000553868 ADHFE1Q8IWW8 467 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 TMEM60Q9H2L4 133 aa16.25■□□□□ 0.19
SHMT2-208ENST00000553868 ALG13Q9NP73 1137 aaKnown RBP16.25■□□□□ 0.19
SHMT2-208ENST00000553868 FRMPD4Q14CM0 1322 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 A0A1B0GVL5 298 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 B4DLN1 442 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 SLC37A4O43826 429 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 RGS20O76081 388 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 SMPD1P17405 629 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 ERVK-21P61565 698 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-208ENST00000553868 CNTN2Q02246 1040 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 PCNX4Q63HM2 1172 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-208ENST00000553868 ANKRD35Q8N283 1001 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 NSUN6Q8TEA1 469 aaKnown RBP16.24■□□□□ 0.19
SHMT2-208ENST00000553868 PBXIP1Q96AQ6 731 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 FAM20AQ96MK3 541 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 MTMR9Q96QG7 549 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 AP5M1Q9H0R1 490 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-208ENST00000553868 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
SHMT2-208ENST00000553868 A1CFQ9NQ94 594 aaKnown RBP16.24■□□□□ 0.19
SHMT2-208ENST00000553868 CYP39A1Q9NYL5 469 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms