RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 SLC9A2Q9UBY0 812 aa9.32□□□□□ -0.92
RDH11-205ENST00000553816 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
RDH11-205ENST00000553816 EVPLQ92817 2033 aa9.32□□□□□ -0.92
RDH11-205ENST00000553816 BTBD18B2RXH4 712 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 IPO5O00410 1097 aaKnown RBP9.31□□□□□ -0.92
RDH11-205ENST00000553816 SOX1O00570 391 aaPredicted RBP9.31□□□□□ -0.92
RDH11-205ENST00000553816 MSH4O15457 936 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 SLC37A4O43826 429 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 ATG7O95352 703 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 MMP1P03956 469 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 ACRP10323 421 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 CSF2RAP15509 400 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 GGCXP38435 758 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 USP11P51784 963 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 CCL23P55773 120 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 ACTR2P61160 394 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 PTPN11Q06124 597 aaPredicted RBP9.31□□□□□ -0.92
RDH11-205ENST00000553816 NONOQ15233 471 aaKnown RBP eCLIP9.31□□□□□ -0.92
RDH11-205ENST00000553816 SHHQ15465 462 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 PTGISQ16647 500 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 MCTP2Q6DN12 878 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 GALNT17Q6IS24 598 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 MFSD5Q6N075 450 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 PIK3AP1Q6ZUJ8 805 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 TDHQ8IZJ6 230 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 FAM177A1Q8N128 213 aaPredicted RBP9.31□□□□□ -0.92
RDH11-205ENST00000553816 GIMAP8Q8ND71 665 aaPredicted RBP9.31□□□□□ -0.92
RDH11-205ENST00000553816 SEPT1Q8WYJ6 367 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 TMX3Q96JJ7 454 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 MBOAT7Q96N66 472 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 ZNF577Q9BSK1 485 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 KATNAL1Q9BW62 490 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 SEZ6LQ9BYH1 1024 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 HIPK3Q9H422 1215 aa9.31□□□□□ -0.92
RDH11-205ENST00000553816 JPH1Q9HDC5 661 aaPredicted RBP9.31□□□□□ -0.92
RDH11-205ENST00000553816 CEP290O15078 2479 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 CYP3A7-CYP3A51PA0A087WV96 503 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 TREHO43280 583 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 LGR5O75473 907 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 SMIM10L2AP0DMW4 78 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 SMIM10L2BP0DMW5 78 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 XBP1P17861 261 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 CYP3A7P24462 503 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 MARK3P27448 753 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 HOXC8P31273 242 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 KRT2P35908 639 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 FXR1P51114 621 aaKnown RBP eCLIP9.3□□□□□ -0.92
RDH11-205ENST00000553816 GPNMBQ14956 572 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 LETM2Q2VYF4 491 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 Q4G0T1 1027 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 ABHD15Q6UXT9 468 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 KRT25Q7Z3Z0 450 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 CCDC60Q8IWA6 550 aaPredicted RBP9.3□□□□□ -0.92
RDH11-205ENST00000553816 DIS3L2Q8IYB7 885 aaKnown RBP9.3□□□□□ -0.92
RDH11-205ENST00000553816 C7orf31Q8N865 590 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 WASF1Q92558 559 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 SLC5A5Q92911 643 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 ZBTB10Q96DT7 871 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.3□□□□□ -0.927e-9■■□□□ 11.4
RDH11-205ENST00000553816 SDF4Q9BRK5 362 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 LLPHQ9BRT6 129 aaKnown RBP9.3□□□□□ -0.92
RDH11-205ENST00000553816 OSBPL7Q9BZF2 842 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 SH2B1Q9NRF2 756 aaPredicted RBP9.3□□□□□ -0.92
RDH11-205ENST00000553816 SETD4Q9NVD3 440 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 ARID2Q68CP9 1835 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 EMSYQ7Z589 1322 aa9.3□□□□□ -0.92
RDH11-205ENST00000553816 RANBP2P49792 3224 aaKnown RBP9.29□□□□□ -0.92
RDH11-205ENST00000553816 IGKV6D-21A0A0A0MT36 114 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 CCDC194A0A1B0GVG4 234 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 KIF28PB7ZC32 967 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 PSMD10O75832 226 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 SUPT20HL2P0C7V6 817 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 ATP4AP20648 1035 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 ADAM17P78536 824 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 SETQ01105 290 aaPredicted RBP9.29□□□□□ -0.92
RDH11-205ENST00000553816 FPGSQ05932 587 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 PLCB4Q15147 1175 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 TRIM71Q2Q1W2 868 aaKnown RBP9.29□□□□□ -0.92
RDH11-205ENST00000553816 TMEM240Q5SV17 173 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 SWT1Q5T5J6 900 aaKnown RBP9.29□□□□□ -0.92
RDH11-205ENST00000553816 ETNPPLQ8TBG4 499 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 LMBR1Q8WVP7 490 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 TRAPPC12Q8WVT3 735 aa9.29□□□□□ -0.92
RDH11-205ENST00000553816 ARIH1Q9Y4X5 557 aaPredicted RBP9.29□□□□□ -0.92
RDH11-205ENST00000553816 MICAL3Q7RTP6 2002 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 A0A1W2PPC1 479 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 C17orf102A2RUQ5 167 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 GRXCR2A6NFK2 248 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 CCNT1O60563 726 aaKnown RBP9.28□□□□□ -0.92
RDH11-205ENST00000553816 IQCF3P0C7M6 154 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 CKBP12277 381 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 SLC19A1P41440 591 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 HMGN5P82970 282 aaKnown RBP9.28□□□□□ -0.92
RDH11-205ENST00000553816 TCTN1Q2MV58 587 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 PKDCCQ504Y2 493 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 MARCH8Q5T0T0 291 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 SWSAP1Q6NVH7 229 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 MOXD1Q6UVY6 613 aa9.28□□□□□ -0.92
RDH11-205ENST00000553816 B3GNT9Q6UX72 402 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms