RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 PDIA3P30101 505 aaKnown RBP12.21□□□□□ -0.45
CNIH1-203ENST00000553660 MRPS9P82933 396 aaKnown RBP12.21□□□□□ -0.45
CNIH1-203ENST00000553660 RELBQ01201 579 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 ITGA7Q13683 1181 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 OXLD1Q5BKU9 147 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 NFRKBQ6P4R8 1299 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 USP17L6PQ6QN14 398 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 HEATR3Q7Z4Q2 680 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 CCDC82Q8N4S0 544 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 PPTC7Q8NI37 304 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 CCDC12Q8WUD4 166 aaPredicted RBP12.21□□□□□ -0.45
CNIH1-203ENST00000553660 PIBF1Q8WXW3 757 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 CDHR1Q96JP9 859 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 RIC8AQ9NPQ8 531 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 TBX21Q9UL17 535 aa12.21□□□□□ -0.45
CNIH1-203ENST00000553660 TRIM43BA6NCK2 446 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 SPATA31C2B4DYI2 1134 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 STXBP3O00186 592 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
CNIH1-203ENST00000553660 FIBPO43427 364 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 PQBP1O60828 265 aaKnown RBP12.2□□□□□ -0.46
CNIH1-203ENST00000553660 PPFIA4O75335 1185 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 SUPT20HL2P0C7V6 817 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 SCG2P13521 617 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 SYN1P17600 705 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 USP4Q13107 963 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 AP3B2Q13367 1082 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 TOB2Q14106 344 aaPredicted RBP12.2□□□□□ -0.46
CNIH1-203ENST00000553660 NEDD9Q14511 834 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 ANKRD1Q15327 319 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 DGKDQ16760 1214 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 LY6KQ17RY6 165 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 LRIT3Q3SXY7 679 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 CELF3Q5SZQ8 465 aaKnown RBP12.2□□□□□ -0.46
CNIH1-203ENST00000553660 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 SESTD1Q86VW0 696 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 TDHQ8IZJ6 230 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 GIMAP8Q8ND71 665 aaPredicted RBP12.2□□□□□ -0.46
CNIH1-203ENST00000553660 IL31RAQ8NI17 732 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 TRIM43Q96BQ3 446 aaPredicted RBP12.2□□□□□ -0.46
CNIH1-203ENST00000553660 GPRASP2Q96D09 838 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 ZMYND12Q9H0C1 365 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 EHMT1Q9H9B1 1298 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 TMEM39AQ9NV64 488 aa12.2□□□□□ -0.46
CNIH1-203ENST00000553660 TIMP1P01033 207 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 MMP3P08254 477 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 MYCLP12524 364 aaPredicted RBP12.19□□□□□ -0.46
CNIH1-203ENST00000553660 PTGIRP43119 386 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 NAPAP54920 295 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 METTL7BQ6UX53 244 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 CYP2U1Q7Z449 544 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 DHX37Q8IY37 1157 aaKnown RBP12.19□□□□□ -0.46
CNIH1-203ENST00000553660 KDF1Q8NAX2 398 aaPredicted RBP12.19□□□□□ -0.46
CNIH1-203ENST00000553660 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 COPS5Q92905 334 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 KATNAL1Q9BW62 490 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 SH3GLB2Q9NR46 395 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 PDRG1Q9NUG6 133 aa12.19□□□□□ -0.46
CNIH1-203ENST00000553660 KIAA1217Q5T5P2 1943 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 SPINT1O43278 529 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 LZTS3O60299 673 aaPredicted RBP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 F2P00734 622 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 RAG1P15918 1043 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 UBA1P22314 1058 aaKnown RBP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 PTGS1P23219 599 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 GNA11P29992 359 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 FXR1P51114 621 aaKnown RBP eCLIP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 ADCY7P51828 1080 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 PKN1Q16512 942 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 MFSD5Q6N075 450 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 NLRX1Q86UT6 975 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 UPF3BQ9BZI7 483 aaKnown RBP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 UBE2OQ9C0C9 1292 aaKnown RBP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 PRDM5Q9NQX1 630 aaPredicted RBP12.18□□□□□ -0.46
CNIH1-203ENST00000553660 PCDHA6Q9UN73 950 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 PCDHA8Q9Y5H6 950 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 SCN10AQ9Y5Y9 1956 aa12.18□□□□□ -0.46
CNIH1-203ENST00000553660 HAS3O00219 553 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 GGPS1O95749 300 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 MYL3P08590 195 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 SREBF1P36956 1147 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 SP2Q02086 613 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 NIPA1Q7RTP0 329 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 TRIM22Q8IYM9 498 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 CCDC148Q8NFR7 591 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 KAT2BQ92831 832 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
CNIH1-203ENST00000553660 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms