RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 COL19A1Q14993 1142 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SEPT2Q15019 361 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 Q6ZS46 218 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 KRT25Q7Z3Z0 450 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 NCAPG2Q86XI2 1143 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SPICE1Q8N0Z3 855 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 STAG2Q8N3U4 1231 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 NUP133Q8WUM0 1156 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MAML3Q96JK9 1138 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MOV10L1Q9BXT6 1211 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCDC8Q9H0W5 538 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SMG9Q9H0W8 520 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TLR7Q9NYK1 1049 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MAFBQ9Y5Q3 323 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P3-201ENST00000553649 LCHNA4D1U4 455 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TGFBR3LH3BV60 316 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ARVCFO00192 962 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FLOT1O75955 427 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZNF865P0CJ78 1059 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TRIM27P14373 513 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SHMT1P34896 483 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PLCD1P51178 756 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 NKX3-2P78367 333 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 COG2Q14746 738 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 KCNA10Q16322 511 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TATDN1Q6P1N9 297 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TTC6Q86TZ1 520 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CLEC10AQ8IUN9 316 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 HERC6Q8IVU3 1022 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 AGGF1Q8N302 714 aaeCLIP6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ASIC4Q96FT7 647 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SPATC1LQ9H0A9 340 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 HIPK3Q9H422 1215 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SUGCTQ9HAC7 445 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SLC5A4Q9NY91 659 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DBNLQ9UJU6 430 aaKnown RBP6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SYNRGQ9UMZ2 1314 aa6.71□□□□□ -1.34
SMARCE1P3-201ENST00000553649 A0A1W2PRG0 241 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 IPO8O15397 1037 aaKnown RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PGK2P07205 417 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CYP2D6P10635 497 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 AKR1A1P14550 325 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GUCY1A2P33402 732 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GPLD1P80108 840 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SMAD2Q15796 467 aaKnown RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TRMT2AQ8IZ69 625 aaKnown RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 RPUSD2Q8IZ73 545 aaKnown RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TMEM57Q8N5G2 664 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SLC43A3Q8NBI5 491 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PHOSPHO2Q8TCD6 241 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SCG3Q8WXD2 468 aaKnown RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ARHGAP45Q92619 1136 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ATG4CQ96DT6 458 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SCLYQ96I15 445 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GLT1D1Q96MS3 346 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 UBL7Q96S82 380 aaPredicted RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SLC9A7Q96T83 725 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 NOC4LQ9BVI4 516 aaKnown RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MRPL18Q9H0U6 180 aaKnown RBP6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 EHD4Q9H223 541 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ANTXR1Q9H6X2 564 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MCM9Q9NXL9 1143 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 HOXC10Q9NYD6 342 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FAM50BQ9Y247 325 aa6.7□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MAST4O15021 2626 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FAM208BQ5VWN6 2430 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 A0A0U1RQG5 324 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TLR3O15455 904 aaKnown RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SASH3O75995 380 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PDGFBP01127 241 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PFKMP08237 780 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FCER1AP12319 257 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SPINK2P20155 84 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 LTBRP36941 435 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ATP1A2P50993 1020 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SIGLEC14Q08ET2 396 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PCSK7Q16549 785 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 KIAA1755Q5JYT7 1200 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 AACSQ86V21 672 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZDHHC13Q8IUH4 622 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SIX5Q8N196 739 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SDR42E1Q8WUS8 393 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 EAF2Q96CJ1 260 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PABPC5Q96DU9 382 aaKnown RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DYNLL2Q96FJ2 89 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MMP19Q99542 508 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 POP1Q99575 1024 aaKnown RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MROH8Q9H579 483 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GPR108Q9NPR9 543 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SH2B1Q9NRF2 756 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MTUS1Q9ULD2 1270 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 RAXQ9Y2V3 346 aa6.69□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MYH1P12882 1939 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SMCHD1A6NHR9 2005 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms