RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SPINK2P20155 84 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 SLC1A4P43007 532 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 FKBP1BP68106 108 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 MTMR3Q13615 1198 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 GRM4Q14833 912 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 SEPT2Q15019 361 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 SAFBQ15424 915 aaKnown RBP eCLIP5.77□□□□□ -1.49
VTI1B-202ENST00000553619 SLFN13Q68D06 897 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 LDHDQ86WU2 507 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 ANKRD13AQ8IZ07 590 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 ZNF713Q8N859 430 aaPredicted RBP5.77□□□□□ -1.49
VTI1B-202ENST00000553619 NSUN7Q8NE18 718 aaKnown RBP5.77□□□□□ -1.49
VTI1B-202ENST00000553619 GMCL1P1Q8NEA9 526 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 CCDC12Q8WUD4 166 aaPredicted RBP5.77□□□□□ -1.49
VTI1B-202ENST00000553619 CHURC1Q8WUH1 139 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 SLC7A3Q8WY07 619 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 C8orf76Q96K31 380 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 DNAJC18Q9H819 358 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 BRMS1Q9HCU9 246 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 SEC63Q9UGP8 760 aaKnown RBP5.77□□□□□ -1.49
VTI1B-202ENST00000553619 PNMA2Q9UL42 364 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 ZBTB21Q9ULJ3 1066 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 SOX13Q9UN79 622 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 TMX2Q9Y320 296 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 CSADQ9Y600 493 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 MYH4Q9Y623 1939 aa5.77□□□□□ -1.49
VTI1B-202ENST00000553619 MYH6P13533 1939 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 PRR19A6NJB7 356 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 F5H6K3 240 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 PLA2G6O60733 806 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 BMP3P12645 472 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 SYT1P21579 422 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 GP2P55259 537 aaKnown RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 KLRC3Q07444 240 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 GNL2Q13823 731 aaKnown RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 NTRK3Q16288 839 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 MAP3K11Q16584 847 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 NOL9Q5SY16 702 aaKnown RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 ANKRD34AQ69YU3 496 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 ATL3Q6DD88 541 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 FDX2Q6P4F2 183 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 TMTC3Q6ZXV5 915 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 FAM160B2Q86V87 743 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 GLYCTKQ8IVS8 523 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 CCDC144CPQ8IYA2 1237 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 SCYL3Q8IZE3 742 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 C2orf69Q8N8R5 385 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 LPAR1Q92633 364 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 RRP36Q96EU6 259 aaKnown RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 DDX11Q96FC9 970 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 GBP4Q96PP9 640 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 WRNIP1Q96S55 665 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 FEZ1Q99689 392 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 ALG1Q9BT22 464 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 ANP32EQ9BTT0 268 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 MYL10Q9BUA6 226 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 WDR18Q9BV38 432 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 RUSC1Q9BVN2 902 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 SPZ1Q9BXG8 430 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 SLC26A6Q9BXS9 759 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 GLT8D2Q9H1C3 349 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 KCNF1Q9H3M0 494 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 NCOA5Q9HCD5 579 aaKnown RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 OSGEPQ9NPF4 335 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 SH3GLB2Q9NR46 395 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 MAD2L2Q9UI95 211 aa5.76□□□□□ -1.49
VTI1B-202ENST00000553619 ISY1Q9ULR0 285 aaKnown RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 CTDP1Q9Y5B0 961 aaPredicted RBP5.76□□□□□ -1.49
VTI1B-202ENST00000553619 ASTN2O75129 1339 aaPredicted RBP5.75□□□□□ -1.49
VTI1B-202ENST00000553619 PNMA6FA0A0J9YX94 578 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 GAS2O43903 313 aaKnown RBP5.75□□□□□ -1.49
VTI1B-202ENST00000553619 CTDNEP1O95476 244 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 BRD1O95696 1058 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 SNHG28P0DPA3 235 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 ZSCAN22P10073 491 aaPredicted RBP5.75□□□□□ -1.49
VTI1B-202ENST00000553619 PDHBP11177 359 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 RXRAP19793 462 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 CALML3P27482 149 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 GNA11P29992 359 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 GUCY1A2P33402 732 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 DDIT3P35638 169 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 IRAK1P51617 712 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 PPATQ06203 517 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 ZNF543Q08ER8 600 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 IKQ13123 557 aaPredicted RBP5.75□□□□□ -1.49
VTI1B-202ENST00000553619 ZNF211Q13398 564 aaPredicted RBP5.75□□□□□ -1.49
VTI1B-202ENST00000553619 CCDC96Q2M329 555 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 PRAMEF18Q5VWM3 479 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 MCTP2Q6DN12 878 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 GALNT17Q6IS24 598 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 BEND4Q6ZU67 534 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 RAB11FIP4Q86YS3 637 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 CLEC10AQ8IUN9 316 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 SRBD1Q8N5C6 995 aaKnown RBP5.75□□□□□ -1.49
VTI1B-202ENST00000553619 CCDC148Q8NFR7 591 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 FBXO18Q8NFZ0 1043 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 SHKBP1Q8TBC3 707 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 ASAP3Q8TDY4 903 aa5.75□□□□□ -1.49
VTI1B-202ENST00000553619 CDCA5Q96FF9 252 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms