RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SELPP16109 830 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 PDCP20941 246 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 TXKP42681 527 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 TOB1P50616 345 aaPredicted RBP25.67■■□□□ 1.7
TDP1-206ENST00000553569 RBL2Q08999 1139 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 C9orf50Q5SZB4 431 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 MARCH8Q5T0T0 291 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 DEFB128Q7Z7B8 93 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 MTMR9Q96QG7 549 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 IL23AQ9NPF7 189 aa25.67■■□□□ 1.7
TDP1-206ENST00000553569 OATP04181 439 aa25.66■■□□□ 1.7
TDP1-206ENST00000553569 HSP90AA1P07900 732 aaKnown RBP25.66■■□□□ 1.7
TDP1-206ENST00000553569 ORC2Q13416 577 aaPredicted RBP25.66■■□□□ 1.7
TDP1-206ENST00000553569 SHHQ15465 462 aa25.66■■□□□ 1.7
TDP1-206ENST00000553569 HABP4Q5JVS0 413 aaKnown RBP25.66■■□□□ 1.7
TDP1-206ENST00000553569 ZNF618Q5T7W0 954 aa25.66■■□□□ 1.7
TDP1-206ENST00000553569 BBXQ8WY36 941 aaPredicted RBP25.66■■□□□ 1.7
TDP1-206ENST00000553569 FAM167AQ96KS9 214 aa25.66■■□□□ 1.7
TDP1-206ENST00000553569 TTC12Q9H892 705 aaPredicted RBP25.66■■□□□ 1.7
TDP1-206ENST00000553569 PCDHA12Q9UN75 941 aa25.66■■□□□ 1.7
TDP1-206ENST00000553569 TRIOBPQ9H2D6 2365 aa25.66■■□□□ 1.7
TDP1-206ENST00000553569 A0A1W2PPC1 479 aa25.65■■□□□ 1.7
TDP1-206ENST00000553569 MBLAC1A4D2B0 266 aaPredicted RBP25.65■■□□□ 1.7
TDP1-206ENST00000553569 CTSHP09668 335 aa25.65■■□□□ 1.7
TDP1-206ENST00000553569 OR52Z1P0C646 297 aa25.65■■□□□ 1.7
TDP1-206ENST00000553569 SPIRE1Q08AE8 756 aa25.65■■□□□ 1.7
TDP1-206ENST00000553569 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.65■■□□□ 1.7
TDP1-206ENST00000553569 PCDHB6Q9Y5E3 794 aa25.65■■□□□ 1.7
TDP1-206ENST00000553569 COL1A2P08123 1366 aa25.65■■□□□ 1.7
TDP1-206ENST00000553569 ZNF484Q5JVG2 852 aa25.64■■□□□ 1.7
TDP1-206ENST00000553569 TAF2Q6P1X5 1199 aa25.64■■□□□ 1.7
TDP1-206ENST00000553569 PSRC1Q6PGN9 363 aaPredicted RBP25.64■■□□□ 1.7
TDP1-206ENST00000553569 FERMT3Q86UX7 667 aa25.64■■□□□ 1.7
TDP1-206ENST00000553569 FAM49AQ9H0Q0 323 aaPredicted RBP25.64■■□□□ 1.7
TDP1-206ENST00000553569 SYT1P21579 422 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 RFC2P35250 354 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 PSMC5P62195 406 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 EPHA7Q15375 998 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 TMEM240Q5SV17 173 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 MTHFD1LQ6UB35 978 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 ZNF365Q70YC5 407 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 C16orf59Q7L2K0 433 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 DNAJB3Q8WWF6 145 aa25.63■■□□□ 1.69
TDP1-206ENST00000553569 RNPC3Q96LT9 517 aaKnown RBP25.63■■□□□ 1.69
TDP1-206ENST00000553569 SEPT9Q9UHD8 586 aaPredicted RBP25.63■■□□□ 1.69
TDP1-206ENST00000553569 POTEMA6NI47 508 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 ZBTB42B2RXF5 422 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 RBAK-RBAKDNI3L0D1 243 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 KLRC1P26715 233 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 CYP4A11Q02928 519 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 RILPL1Q5EBL4 403 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 TRAF7Q6Q0C0 670 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 RPUSD2Q8IZ73 545 aaKnown RBP25.62■■□□□ 1.69
TDP1-206ENST00000553569 DYDC2Q96IM9 177 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 FTOQ9C0B1 505 aaKnown RBP eCLIP25.62■■□□□ 1.69
TDP1-206ENST00000553569 NRBP2Q9NSY0 501 aa25.62■■□□□ 1.69
TDP1-206ENST00000553569 TMEM150BA6NC51 233 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 RSPH10B2B2RC85 870 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 CAND2O75155 1236 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 P4HBP07237 508 aaKnown RBP25.61■■□□□ 1.69
TDP1-206ENST00000553569 RSPH10BP0C881 870 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 QARSP47897 775 aaKnown RBP25.61■■□□□ 1.69
TDP1-206ENST00000553569 RSPH3Q86UC2 560 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 SPRYD3Q8NCJ5 442 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 VWCEQ96DN2 955 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 LXNQ9BS40 222 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 RGL1Q9NZL6 768 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 CEP131Q9UPN4 1083 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 PCDHA2Q9Y5H9 948 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 EVPLQ92817 2033 aa25.61■■□□□ 1.69
TDP1-206ENST00000553569 TET1Q8NFU7 2136 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 TECP42680 631 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 PTGDRQ13258 359 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 CTTNQ14247 550 aaKnown RBP25.6■■□□□ 1.69
TDP1-206ENST00000553569 MTERF2Q49AM1 385 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 XKR3Q5GH77 459 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 OTOP2Q7RTS6 562 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 BRAPQ7Z569 592 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 C4orf32Q8N8J7 132 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 EIF2AK1Q9BQI3 630 aaKnown RBP25.6■■□□□ 1.69
TDP1-206ENST00000553569 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.6■■□□□ 1.69
TDP1-206ENST00000553569 WRAP73Q9P2S5 460 aaPredicted RBP25.6■■□□□ 1.69
TDP1-206ENST00000553569 SIP14410 1827 aa25.6■■□□□ 1.69
TDP1-206ENST00000553569 DDX11L8A8MPP1 907 aa25.59■■□□□ 1.69
TDP1-206ENST00000553569 NBNO60934 754 aa25.59■■□□□ 1.69
TDP1-206ENST00000553569 C22orf31O95567 290 aa25.59■■□□□ 1.69
TDP1-206ENST00000553569 FGBP02675 491 aa25.59■■□□□ 1.69
TDP1-206ENST00000553569 PFKMP08237 780 aa25.59■■□□□ 1.69
TDP1-206ENST00000553569 MBTPS1Q14703 1052 aa25.59■■□□□ 1.69
TDP1-206ENST00000553569 SH2D3AQ9BRG2 576 aa25.59■■□□□ 1.69
TDP1-206ENST00000553569 RANBP2P49792 3224 aaKnown RBP25.58■■□□□ 1.69
TDP1-206ENST00000553569 SMIM35A0A1B0GVV1 85 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 DKC1O60832 514 aaKnown RBP eCLIP25.58■■□□□ 1.69
TDP1-206ENST00000553569 STBD1O95210 358 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 PARNO95453 639 aaKnown RBP25.58■■□□□ 1.69
TDP1-206ENST00000553569 TMEM62Q0P6H9 643 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 GPNMBQ14956 572 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 TMEM266Q2M3C6 531 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 PLA2G4FQ68DD2 849 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 RPAINQ86UA6 219 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms