RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SCN4AP35499 1836 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 POLR3GO15318 223 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 TBCAO75347 108 aaKnown RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 CLSTN1O94985 981 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 GDF11O95390 407 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 AFPP02771 609 aaKnown RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 RPS12P25398 132 aaKnown RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 ZNF76P36508 570 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 PAFAH1B1P43034 410 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 KCNH2Q12809 1159 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 FKBP1CQ5VVH2 108 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 SMCR8Q8TEV9 937 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 CHURC1Q8WUH1 139 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 GJA10Q969M2 543 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 GMLQ99445 158 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 LSM14BQ9BX40 385 aaKnown RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 TDRD3Q9H7E2 651 aaKnown RBP14.19□□□□□ -0.14
SHMT2-205ENST00000553474 HDAC9Q9UKV0 1011 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 TFR2Q9UP52 801 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 TMX2Q9Y320 296 aa14.19□□□□□ -0.14
SHMT2-205ENST00000553474 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 CES2O00748 559 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 SRGAP2O75044 1071 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 TFRCP02786 760 aaKnown RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 XRCC5P13010 732 aaKnown RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 STAT3P40763 770 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 POLR2FP61218 127 aaKnown RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 SETQ01105 290 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 PPP2R5CQ13362 524 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 IFI16Q16666 785 aaKnown RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 USH1GQ495M9 461 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 STXBP4Q6ZWJ1 553 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 CAPZA3Q96KX2 299 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 P2RX7Q99572 595 aaKnown RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 GANQ9H2C0 597 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 PDE11AQ9HCR9 933 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 TBC1D7Q9P0N9 293 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 CALCOCO1Q9P1Z2 691 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 CNOT7Q9UIV1 285 aaKnown RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 ZHX1Q9UKY1 873 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-205ENST00000553474 PCDHAC2Q9Y5I4 1007 aa14.18□□□□□ -0.14
SHMT2-205ENST00000553474 IGLV3-22A0A075B6J6 115 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 GLTPD2A6NH11 291 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 OPLAHO14841 1288 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 PPP1R12BO60237 982 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 TBC1D12O60347 775 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 MOCS3O95396 460 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 EPB41P11171 864 aaKnown RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 TNFRSF8P28908 595 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 GFPT1Q06210 699 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 PABPC4Q13310 644 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■■ 31.8
SHMT2-205ENST00000553474 NAB2Q15742 525 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 CCDC181Q5TID7 509 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 FAM160B2Q86V87 743 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 SFR1Q86XK3 245 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 COG1Q8WTW3 980 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 FAM151AQ8WW52 585 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 HSD17B14Q9BPX1 270 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 EIF2AK1Q9BQI3 630 aaKnown RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 MKNK1Q9BUB5 465 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 FGFBP2Q9BYJ0 223 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 WDR11Q9BZH6 1224 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 DEFB129Q9H1M3 183 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 NLRC4Q9NPP4 1024 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 PCDHGC5Q9Y5F6 944 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 NPHP3-ACAD11A0A0J9YXS1 232 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 GRID2IPA4D2P6 1211 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 TLR2O60603 784 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 PRKCIP41743 596 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 KLHL30Q0D2K2 578 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 ASIC2Q16515 512 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 CFAP221Q4G0U5 840 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 TBC1D10BQ4KMP7 808 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 CCNI2Q6ZMN8 369 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 SPATA4Q8NEY3 305 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 NEK9Q8TD19 979 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 PRMT6Q96LA8 375 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
SHMT2-205ENST00000553474 ZHX3Q9H4I2 956 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 GPRC5DQ9NZD1 345 aa14.17□□□□□ -0.14
SHMT2-205ENST00000553474 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 H3BQF6 201 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 GCOM1H8Y6P7 765 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-205ENST00000553474 PSMD10O75832 226 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 GFPT2O94808 682 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 POLR2MP0CAP2 368 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 RAPGEF1Q13905 1077 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 EXOC3L4Q17RC7 722 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 OTOP1Q7RTM1 612 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 SAMD7Q7Z3H4 446 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 SLC5A5Q92911 643 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 MLXIPQ9HAP2 919 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 MYOZ2Q9NPC6 264 aa14.16□□□□□ -0.14
SHMT2-205ENST00000553474 ODF2LQ9ULJ1 636 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms