RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 NEK9Q8TD19 979 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 AK8Q96MA6 479 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 KATNAL1Q9BW62 490 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 AZI2Q9H6S1 392 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 HDAC6Q9UBN7 1215 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 GTF2IRD1Q9UHL9 959 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 TCEAL9Q9UHQ7 104 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 ZNF215Q9UL58 517 aaPredicted RBP16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
MTHFD1-204ENST00000553405 TMEM150BA6NC51 233 aa16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 ZBTB39O15060 712 aa16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 CD4P01730 458 aa16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 OATP04181 439 aa16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 PTPN11Q06124 597 aaPredicted RBP16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 ZNF579Q8NAF0 562 aaKnown RBP16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 LMBR1Q8WVP7 490 aa16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 NIFKQ9BYG3 293 aaKnown RBP16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 TRIP12Q14669 1992 aaPredicted RBP16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 ARID2Q68CP9 1835 aa16.65■□□□□ 0.26
MTHFD1-204ENST00000553405 POTEB3A0JP26 581 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 MBLAC1A4D2B0 266 aaPredicted RBP16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 INSRRP14616 1297 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 MUTP22033 750 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 RGS19P49795 217 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 ATN1P54259 1190 aaPredicted RBP16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 GRB10Q13322 594 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 TMEM119Q4V9L6 283 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 GDF6Q6KF10 455 aaPredicted RBP16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 POTEBQ6S5H4 581 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 POTEGQ6S5H5 508 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 CLEC17AQ6ZS10 378 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 KCNK18Q7Z418 384 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 FAM126BQ8IXS8 530 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 BBXQ8WY36 941 aaPredicted RBP16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 SEZ6LQ9BYH1 1024 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 ZSWIM4Q9H7M6 989 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 GDPD2Q9HCC8 539 aa16.64■□□□□ 0.25
MTHFD1-204ENST00000553405 SLC26A4O43511 780 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 HBP1O60381 514 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 CUTAO60888 179 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 ZNF200P98182 395 aaPredicted RBP16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 TRIM60Q495X7 471 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 XKR3Q5GH77 459 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 SPECC1Q5M775 1068 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 SNX29Q8TEQ0 813 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 TRAPPC12Q8WVT3 735 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 FAM167AQ96KS9 214 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 TOX2Q96NM4 488 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 SCAND2PQ9GZW5 306 aaPredicted RBP16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 SETD4Q9NVD3 440 aa16.63■□□□□ 0.25
MTHFD1-204ENST00000553405 A0A087WWV3 80 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 A0A087X0B3 334 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 B4GALT4O60513 344 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 CCT6AP40227 531 aaKnown RBP16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 RTP1P59025 263 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 TLE2Q04725 743 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 GRIK4Q16099 956 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 TPH2Q8IWU9 490 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 LINC01465Q8N7H1 131 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 ERMNQ8TAM6 284 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 DHX38Q92620 1227 aaKnown RBP16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 WNT8BQ93098 351 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 ZBTB10Q96DT7 871 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 TRPV6Q9H1D0 765 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 NRCAMQ92823 1304 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 COL1A2P08123 1366 aa16.62■□□□□ 0.25
MTHFD1-204ENST00000553405 FAM237AA0A1B0GTK4 181 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 C22orf31O95567 290 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 XRCC6P12956 609 aaKnown RBP eCLIP16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 YWHABP31946 246 aaKnown RBP16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 NPEPPSP55786 919 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 FAAP100Q0VG06 881 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 TRIM71Q2Q1W2 868 aaKnown RBP16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 NAALADL2Q58DX5 795 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 ZNF484Q5JVG2 852 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 RESP18Q5W5W9 173 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 KRT79Q5XKE5 535 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 PLA2G4FQ68DD2 849 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 CABP7Q86V35 215 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 SERINC5Q86VE9 423 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 PIGOQ8TEQ8 1089 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 VTI1AQ96AJ9 217 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 BLOC1S4Q9NUP1 217 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 TBX21Q9UL17 535 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 TRPC6Q9Y210 931 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms