RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 KLHL29Q96CT2 875 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 PRMT1Q99873 361 aaKnown RBP12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 TRIM6Q9C030 488 aaPredicted RBP12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 C4BP0C0L5 1744 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 CLGNO14967 610 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 UCHL3P15374 230 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 SIK1P57059 783 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 DRP2Q13474 957 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 PROM2Q8N271 834 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 SETDB2Q96T68 719 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 NOD2Q9HC29 1040 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 NAGPAQ9UK23 515 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 ZNF804BA4D1E1 1349 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 CDK8P49336 464 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 KIF2BQ8N4N8 673 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 GDAP1Q8TB36 358 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 G3V3G9 751 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 TNFRSF8P28908 595 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 SSR1P43307 286 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 GSCP56915 257 aaPredicted RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 GSTO1P78417 241 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 PREPLQ4J6C6 727 aaPredicted RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 YTHDF3Q7Z739 585 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 LRRC34Q8IZ02 419 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 ZNF384Q8TF68 577 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 NT5C3AQ9H0P0 336 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 CNOT10Q9H9A5 744 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 FGFR4P22455 802 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 RPL13P26373 211 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 CALRP27797 417 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 SEMA3FQ13275 785 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 SPRED3Q2MJR0 410 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 NBPF9Q3BBW0 867 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 SYCP3Q8IZU3 236 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 MRRFQ96E11 262 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 FGFBP2Q9BYJ0 223 aa12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 DBR1Q9UK59 544 aaKnown RBP12.59□□□□□ -0.39
PPFIA2-227ENST00000552948 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 BTDP43251 543 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 CYP2J2P51589 502 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 PMS2P54278 862 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 UAP1Q16222 522 aaPredicted RBP12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 NUGGCQ68CJ6 796 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 CD302Q8IX05 232 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 NSMCE1Q8WV22 266 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 STAMBPL1Q96FJ0 436 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 NAP1L3Q99457 506 aaPredicted RBP12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 CHMP2AO43633 222 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 SPOPO43791 374 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 ACSL3O95573 720 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 NTSR2O95665 410 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 GALCP54803 685 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 LACTBP83111 547 aaPredicted RBP12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 PRR16Q569H4 304 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 MREGQ8N565 214 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 FAM167BQ9BTA0 163 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 PSTPIP2Q9H939 334 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 BZW2Q9Y6E2 419 aaKnown RBP12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L15C9J2P7 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L13C9JLJ4 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L11C9JVI0 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L18D6R9N7 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L22D6RA61 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L17D6RBQ6 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L19D6RCP7 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L20D6RJB6 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 DDR1Q08345 913 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L24Q0WX57 530 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 MESDQ14696 234 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 USP17L6PQ6QN14 398 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 MAEAQ7L5Y9 396 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 TPCN2Q8NHX9 752 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 ANKRD2Q9GZV1 360 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 TBK1Q9UHD2 729 aa12.58□□□□□ -0.4
PPFIA2-227ENST00000552948 RASGRF2O14827 1237 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 PLCB4Q15147 1175 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms