RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ZNF200P98182 395 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 PRKCEQ02156 737 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 TRIM71Q2Q1W2 868 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 SWSAP1Q6NVH7 229 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 SETD4Q9NVD3 440 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 GABBR1Q9UBS5 961 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 TREHO43280 583 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 HBP1O60381 514 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 OATP04181 439 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 RPLP2P05387 115 aaKnown RBP13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 INSRRP14616 1297 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 RFC2P35250 354 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 UGCGQ16739 394 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 WNT8BQ93098 351 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-209ENST00000552896 EML1O00423 815 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 LAD1O00515 517 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 ZNF862O60290 1169 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 PARNO95453 639 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 PFKMP08237 780 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 CKBP12277 381 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 CSF2RAP15509 400 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 SELPP16109 830 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 ATP4AP20648 1035 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 SYT1P21579 422 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 ZNF484Q5JVG2 852 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 MARCH8Q5T0T0 291 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 LRRC8DQ7L1W4 858 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 RPAINQ86UA6 219 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 TDHQ8IZJ6 230 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 NEK9Q8TD19 979 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 TTC12Q9H892 705 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
TRAFD1-209ENST00000552896 MYH11P35749 1972 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 ZBTB42B2RXF5 422 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 DKC1O60832 514 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 CCL23P55773 120 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 PSMC5P62195 406 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 IGBP1P78318 339 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 NBR1Q14596 966 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 EPHA7Q15375 998 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 ZNF174Q15697 407 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 LXNQ9BS40 222 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 IL23AQ9NPF7 189 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
TRAFD1-209ENST00000552896 POTEMA6NI47 508 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 STX6O43752 255 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 C22orf31O95567 290 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 IQCF3P0C7M6 154 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 PDIA4P13667 645 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 THPOP40225 353 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 PRPHP41219 470 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 TXKP42681 527 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 EPHB4P54760 987 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 RSPH3Q86UC2 560 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 TRAPPC12Q8WVT3 735 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 SCLYQ96I15 445 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 PCDHA2Q9Y5H9 948 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 TCHHQ07283 1943 aa13.15□□□□□ -0.3
TRAFD1-209ENST00000552896 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 BMP15O95972 392 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 ATP2C1P98194 919 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 RESTQ13127 1097 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 PTGDRQ13258 359 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 MTHFD1LQ6UB35 978 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 C4orf19Q8IY42 314 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 C4orf32Q8N8J7 132 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 NIFKQ9BYG3 293 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 NRBP2Q9NSY0 501 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 SEPT9Q9UHD8 586 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 MTMR6Q9Y217 621 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms