RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ME3Q16798 604 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 LRIT3Q3SXY7 679 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 PRR16Q569H4 304 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 C9orf50Q5SZB4 431 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 FAM160B1Q5W0V3 765 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 MIS18BP1Q6P0N0 1132 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 ZNF365Q70YC5 407 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 KRT25Q7Z3Z0 450 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 LAPTM4BQ86VI4 370 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 SESTD1Q86VW0 696 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 CKAP2LQ8IYA6 745 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 FAM177A1Q8N128 213 aaPredicted RBP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 FAM184AQ8NB25 1140 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 CYP2W1Q8TAV3 490 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 TBCKQ8TEA7 893 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 AFAP1L1Q8TED9 768 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 GTF3C6Q969F1 213 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 ZSCAN31Q96LW9 406 aaPredicted RBP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 UIMC1Q96RL1 719 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 C16orf70Q9BSU1 422 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 KDM4CQ9H3R0 1056 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 BCAS3Q9H6U6 928 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 TMEM134Q9H6X4 195 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 AGO4Q9HCK5 861 aaKnown RBP6.69□□□□□ -1.34
CCDC65-204ENST00000552188 TBC1D22BQ9NU19 505 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 KCNJ14Q9UNX9 436 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 SAMM50Q9Y512 469 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 UMODL1Q5DID0 1318 aa6.69□□□□□ -1.34
CCDC65-204ENST00000552188 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 GSTTP1A0A1W2PQM5 241 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 DDX11L8A8MPP1 907 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 FAM86B1E9PN63 330 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 HAS3O00219 553 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 BAG4O95429 457 aaKnown RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 PARNO95453 639 aaKnown RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 PSAPP07602 524 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 PFKMP08237 780 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 FAM86B2P0C5J1 330 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 IQCF3P0C7M6 154 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 HOXD8P13378 290 aaPredicted RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 SELPP16109 830 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 CLCN1P35523 988 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 THPOP40225 353 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 STAT5BP51692 787 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 EPHB4P54760 987 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 ACTR2P61160 394 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 IGBP1P78318 339 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 ZNF200P98182 395 aaPredicted RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 PPFIA1Q13136 1202 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 RABEP1Q15276 862 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 LETM2Q2VYF4 491 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 TMEM240Q5SV17 173 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 ZNF697Q5TEC3 545 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 LRRC8DQ7L1W4 858 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 OTOP2Q7RTS6 562 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 RSPH3Q86UC2 560 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 TRIM50Q86XT4 487 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 CCDC83Q8IWF9 413 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 DAGLBQ8NCG7 672 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 WNT2BQ93097 391 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 LRCH3Q96II8 777 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 AIFM3Q96NN9 605 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 NAP1L4Q99733 375 aaKnown RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 TEKT3Q9BXF9 490 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 RNPEPQ9H4A4 650 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 ZNF302Q9NR11 478 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 SH2B1Q9NRF2 756 aaPredicted RBP6.68□□□□□ -1.34
CCDC65-204ENST00000552188 SETD4Q9NVD3 440 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 KIF3AQ9Y496 699 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 SLC4A7Q9Y6M7 1214 aa6.68□□□□□ -1.34
CCDC65-204ENST00000552188 MICAL3Q7RTP6 2002 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 DNAH12Q6ZR08 3092 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 RRN3P2A6NIE6 340 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 WDR64B1ANS9 1081 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 RSPH10B2B2RC85 870 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 M0QZ92 97 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 SOX1O00570 391 aaPredicted RBP6.67□□□□□ -1.34
CCDC65-204ENST00000552188 TREHO43280 583 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 CHMP2AO43633 222 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 CCNT1O60563 726 aaKnown RBP6.67□□□□□ -1.34
CCDC65-204ENST00000552188 GAS7O60861 476 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 DTNBO60941 627 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 LARGE1O95461 756 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 RSPH10BP0C881 870 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 CKBP12277 381 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 KCNJ6P48051 423 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 SLC26A2P50443 739 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 HMGN5P82970 282 aaKnown RBP6.67□□□□□ -1.34
CCDC65-204ENST00000552188 KRT76Q01546 638 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 ITGB3BPQ13352 177 aaPredicted RBP6.67□□□□□ -1.34
CCDC65-204ENST00000552188 INF2Q27J81 1249 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 LRCH2Q5VUJ6 765 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 ZNF746Q6NUN9 644 aaPredicted RBP6.67□□□□□ -1.34
CCDC65-204ENST00000552188 SWSAP1Q6NVH7 229 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 PDXDC2PQ6P474 469 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 PIK3AP1Q6ZUJ8 805 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 PLPPR4Q7Z2D5 763 aa6.67□□□□□ -1.34
CCDC65-204ENST00000552188 TRMT1LQ7Z2T5 733 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms