RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CCDC69A6NI79 296 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 PLEKHA8P1O95397 391 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 CALM1P0DP23 149 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 CALM2P0DP24 149 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 CALM3P0DP25 149 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 TMEM62Q0P6H9 643 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 TRIM67Q6ZTA4 783 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 BMP8AQ7Z5Y6 402 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 ADGRD2Q7Z7M1 963 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 RTN4RL1Q86UN2 441 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 CRIPAKQ8N1N5 446 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 NME8Q8N427 588 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 SRBD1Q8N5C6 995 aaKnown RBP16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 PRRX2Q99811 253 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 CLEC1BQ9P126 229 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 SLC9A2Q9UBY0 812 aa16.24■□□□□ 0.19
CHMP1A-210ENST00000551981 PLXNA4Q9HCM2 1894 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 TMEM221A6NGB7 291 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 LOC730098B7Z3J9 87 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 M0R296 226 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 PRC1O43663 620 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 PTPN5P54829 565 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 UBE2SQ16763 222 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 PLPPR4Q7Z2D5 763 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 RBM23Q86U06 439 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 SUGP1Q8IWZ8 645 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 EXOC6Q8TAG9 804 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 PBXIP1Q96AQ6 731 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 ZBTB10Q96DT7 871 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 CELF4Q9BZC1 486 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 AAASQ9NRG9 546 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 PCDHA6Q9UN73 950 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 PCDHB12Q9Y5F1 795 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 PCDHA8Q9Y5H6 950 aa16.23■□□□□ 0.19
CHMP1A-210ENST00000551981 KDM3AQ9Y4C1 1321 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 SMIM35A0A1B0GVV1 85 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 SGSM2O43147 1006 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 MCM5P33992 734 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 KRT76Q01546 638 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 UBE3AQ05086 875 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 PLCB4Q15147 1175 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 SPOUT1Q5T280 376 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 CMTR1Q8N1G2 835 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 MICAL1Q8TDZ2 1067 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 MAP4K1Q92918 833 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 TMEM87BQ96K49 555 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 PCYT2Q99447 389 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 TLE6Q9H808 572 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 KCNH7Q9NS40 1196 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 PCDHB7Q9Y5E2 793 aa16.22■□□□□ 0.19
CHMP1A-210ENST00000551981 NFASCO94856 1347 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 USP34Q70CQ2 3546 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 SH2B2O14492 632 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 PPFIA3O75145 1194 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 SRGAP2BP0DMP2 458 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 IBSPP21815 317 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 PDE4AP27815 886 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 SARSP49591 514 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 SLC26A2P50443 739 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 STAT5BP51692 787 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 ACTR2P61160 394 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 ZXDAP98168 799 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 NFX1Q12986 1120 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 CBX2Q14781 532 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 ODR4Q5SWX8 454 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 HEATR3Q7Z4Q2 680 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 TRAPPC12Q8WVT3 735 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 MXRA8Q9BRK3 442 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 PHF7Q9BWX1 381 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 BARX2Q9UMQ3 279 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 RBM8AQ9Y5S9 174 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 SLC12A7Q9Y666 1083 aa16.21■□□□□ 0.19
CHMP1A-210ENST00000551981 FNDC1Q4ZHG4 1894 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 ZDBF2Q9HCK1 2354 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 DENND3A2RUS2 1198 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 GLP2RO95838 553 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 RXRAP19793 462 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 LIFRP42702 1097 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 GATMP50440 423 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 TMEM266Q2M3C6 531 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 TEX2Q8IWB9 1127 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 PRSS33Q8NF86 280 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 CDCA3Q99618 268 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 TMX1Q9H3N1 280 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 TLR9Q9NR96 1032 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 C1orf112Q9NSG2 853 aa16.2■□□□□ 0.18
CHMP1A-210ENST00000551981 hCG_1642624A0A1W2PR95 340 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 RPS6KA5O75582 802 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 ATF7P17544 494 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 PDE12Q6L8Q7 609 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 CCDC82Q8N4S0 544 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 FBXL6Q8N531 539 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 RPGRIP1Q96KN7 1286 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 GINS2Q9Y248 185 aa16.19■□□□□ 0.18
CHMP1A-210ENST00000551981 TBKBP1A7MCY6 615 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms