RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 CCDC155Q8N6L0 562 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 PPP1R12CQ9BZL4 782 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 UNC45AQ9H3U1 944 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 TTC12Q9H892 705 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-225ENST00000551845 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 TREHO43280 583 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 DKC1O60832 514 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTCH1-225ENST00000551845 SYT1P21579 422 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 ITGB8P26012 769 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 CYP2C18P33260 490 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 PPP2R5CQ13362 524 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 GRIN2CQ14957 1233 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 EPHA7Q15375 998 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 GRIK4Q16099 956 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 POTEHQ6S545 545 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 B3GNT9Q6UX72 402 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 TRMT1LQ7Z2T5 733 aaKnown RBP11.95□□□□□ -0.5
PTCH1-225ENST00000551845 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-225ENST00000551845 RPUSD2Q8IZ73 545 aaKnown RBP11.95□□□□□ -0.5
PTCH1-225ENST00000551845 CAGE1Q8TC20 777 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 ATP8B4Q8TF62 1192 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-225ENST00000551845 MTMR9Q96QG7 549 aa11.95□□□□□ -0.5
PTCH1-225ENST00000551845 NOC4LQ9BVI4 516 aaKnown RBP11.95□□□□□ -0.5
PTCH1-225ENST00000551845 SPTBN5Q9NRC6 3674 aaKnown RBP11.95□□□□□ -0.5
PTCH1-225ENST00000551845 LRRC37A2A6NM11 1700 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 VPS37CA5D8V6 355 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-225ENST00000551845 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 WNT7AO00755 349 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 ATP4AP20648 1035 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 HOXC8P31273 242 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 TOB1P50616 345 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-225ENST00000551845 CCL23P55773 120 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 PSMC5P62195 406 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 IGBP1P78318 339 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 ADAM17P78536 824 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 FPGSQ05932 587 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTCH1-225ENST00000551845 HIC1Q14526 733 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 ZNF484Q5JVG2 852 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 TAF2Q6P1X5 1199 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 FAM167AQ96KS9 214 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 CEP131Q9UPN4 1083 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 VCANP13611 3396 aa11.94□□□□□ -0.5
PTCH1-225ENST00000551845 EYSQ5T1H1 3165 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 EML1O00423 815 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 LAD1O00515 517 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 STX6O43752 255 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 PARNO95453 639 aaKnown RBP11.93□□□□□ -0.5
PTCH1-225ENST00000551845 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
PTCH1-225ENST00000551845 OR52Z1P0C646 297 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 IQCF3P0C7M6 154 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 CSF2RAP15509 400 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 KLRC1P26715 233 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 THPOP40225 353 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 TECP42680 631 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 QARSP47897 775 aaKnown RBP11.93□□□□□ -0.5
PTCH1-225ENST00000551845 BECN1Q14457 450 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 XKR3Q5GH77 459 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 NCAPH2Q6IBW4 605 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 BRAPQ7Z569 592 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 RSPH3Q86UC2 560 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 SERINC5Q86VE9 423 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 LMBR1Q8WVP7 490 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 CTAGE1Q96RT6 745 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-225ENST00000551845 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 VAV3Q9UKW4 847 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 PCDHB6Q9Y5E3 794 aa11.93□□□□□ -0.5
PTCH1-225ENST00000551845 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-225ENST00000551845 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-225ENST00000551845 MBLAC1A4D2B0 266 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-225ENST00000551845 DDX11L8A8MPP1 907 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 MAGEB2O15479 319 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
PTCH1-225ENST00000551845 CKBP12277 381 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 SELPP16109 830 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 DNAJB2P25686 324 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 RFC2P35250 354 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 PTGDRQ13258 359 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 PDIA5Q14554 519 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 TMEM266Q2M3C6 531 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 MARCH8Q5T0T0 291 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 OTUD6AQ7L8S5 288 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 TPH2Q8IWU9 490 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 NME8Q8N427 588 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 C4orf32Q8N8J7 132 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 BANK1Q8NDB2 785 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 ATXN2LQ8WWM7 1075 aaKnown RBP11.92□□□□□ -0.5
PTCH1-225ENST00000551845 SCLYQ96I15 445 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 RAB34Q9BZG1 259 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-225ENST00000551845 ZNF576Q9H609 170 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.92□□□□□ -0.5
PTCH1-225ENST00000551845 THEGQ9P2T0 379 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 TUBE1Q9UJT0 475 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 PCDHA2Q9Y5H9 948 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms