RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-209ENST00000550872 TRIM43Q96BQ3 446 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-209ENST00000550872 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
CHMP1A-209ENST00000550872 FAM167AQ96KS9 214 aa18.22■□□□□ 0.51
CHMP1A-209ENST00000550872 EIF2AK1Q9BQI3 630 aaKnown RBP18.22■□□□□ 0.51
CHMP1A-209ENST00000550872 TBX21Q9UL17 535 aa18.22■□□□□ 0.51
CHMP1A-209ENST00000550872 TRIOBPQ9H2D6 2365 aa18.22■□□□□ 0.51
CHMP1A-209ENST00000550872 SZT2Q5T011 3432 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 OATP04181 439 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 HOXC8P31273 242 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 FXR2P51116 673 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 PTK7Q13308 1070 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 CTTNQ14247 550 aaKnown RBP18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 ZNF484Q5JVG2 852 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 TPH2Q8IWU9 490 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 ZNF396Q96N95 335 aaPredicted RBP18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 CTAGE1Q96RT6 745 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 RAB34Q9BZG1 259 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 PPP1R12CQ9BZL4 782 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 FTOQ9C0B1 505 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 HIPK3Q9H422 1215 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 CLIC4Q9Y696 253 aa18.21■□□□□ 0.51
CHMP1A-209ENST00000550872 DDX11L8A8MPP1 907 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 SLITRK3O94933 977 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 ADAM17P78536 824 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 CYP4A11Q02928 519 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 PDIA5Q14554 519 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 XKR3Q5GH77 459 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 ARL6IP4Q66PJ3 421 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 ERMNQ8TAM6 284 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 TRAPPC12Q8WVT3 735 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 LXNQ9BS40 222 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 NOC4LQ9BVI4 516 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
CHMP1A-209ENST00000550872 BRD1O95696 1058 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 TIMP1P01033 207 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 BFSP2Q13515 415 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 IL17AQ16552 155 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 FOXD4L6Q3SYB3 417 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 MARCH8Q5T0T0 291 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 FOXD4L3Q6VB84 417 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 SERINC5Q86VE9 423 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 C4orf19Q8IY42 314 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 CCDC155Q8N6L0 562 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 RETREG2Q8NC44 543 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 NEK9Q8TD19 979 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 USP28Q96RU2 1077 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 HSD17B14Q9BPX1 270 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 LBHD1Q9BQE6 289 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 ZSWIM4Q9H7M6 989 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
CHMP1A-209ENST00000550872 COL1A2P08123 1366 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 VWA3AA6NCI4 1184 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 STBD1O95210 358 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 ITGB8P26012 769 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 CYP2C18P33260 490 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 PTPAQ15257 358 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 IGSF22Q8N9C0 903 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 CAGE1Q8TC20 777 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 DHX38Q92620 1227 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 BADQ92934 168 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 WRAP73Q9P2S5 460 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 TFIP11Q9UBB9 837 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 SEPT9Q9UHD8 586 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
CHMP1A-209ENST00000550872 MBLAC1A4D2B0 266 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 ZBTB42B2RXF5 422 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 KLRC1P26715 233 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 CCT6AP40227 531 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 MDM2Q00987 491 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 MTHFD1LQ6UB35 978 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 CATSPER3Q86XQ3 398 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 WNT8BQ93098 351 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 ZBTB10Q96DT7 871 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 POLR3CQ9BUI4 534 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 NIFKQ9BYG3 293 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 PRO3102Q9H379 93 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 TUFT1Q9NNX1 390 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 STK24Q9Y6E0 443 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 UMODL1Q5DID0 1318 aa18.17■□□□□ 0.5
CHMP1A-209ENST00000550872 TMEM150BA6NC51 233 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 MED24O75448 989 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 LYPLA2O95372 231 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 SPATA31C1P0DKV0 1188 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 RPA1P27694 616 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 MARCKSP29966 332 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 YWHABP31946 246 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 THPOP40225 353 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 CCL23P55773 120 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 SLC39A14Q15043 492 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 STK38Q15208 465 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 MTERF2Q49AM1 385 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 KRT79Q5XKE5 535 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 HAUS3Q68CZ6 603 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 TAF2Q6P1X5 1199 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 CHRDL2Q6WN34 429 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 RUFY4Q6ZNE9 571 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 ANO5Q75V66 913 aa18.16■□□□□ 0.5
CHMP1A-209ENST00000550872 OTUD6AQ7L8S5 288 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms