RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 PCDHA13Q9Y5I0 950 aa12.68□□□□□ -0.38
LGR5-206ENST00000550851 SRGAP2O75044 1071 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 APOBEC3FQ8IUX4 373 aaKnown RBP12.67□□□□□ -0.38
LGR5-206ENST00000550851 C7orf31Q8N865 590 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 TUBE1Q9UJT0 475 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 EBAG9O00559 213 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 GAS8O95995 478 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 P4HA1P13674 534 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 DPYDQ12882 1025 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 NLRP7Q8WX94 980 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 ZKSCAN4Q969J2 545 aaPredicted RBP12.67□□□□□ -0.38
LGR5-206ENST00000550851 RPGRIP1Q96KN7 1286 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 THAP12O43422 761 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 LMNB1P20700 586 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 SLC30A10Q6XR72 485 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 AFAP1L1Q8TED9 768 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 MSTO1Q9BUK6 570 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 FAM205AQ6ZU69 1335 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 SLC37A4O43826 429 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
LGR5-206ENST00000550851 TFDP1Q14186 410 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 PDIA5Q14554 519 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 XXYLT1Q8NBI6 393 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 CHP1Q99653 195 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 FAM213AQ9BRX8 229 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 KCNF1Q9H3M0 494 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 ACAD9Q9H845 621 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 DDX4Q9NQI0 724 aaKnown RBP12.67□□□□□ -0.38
LGR5-206ENST00000550851 HESX1Q9UBX0 185 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
LGR5-206ENST00000550851 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 VIMP08670 466 aaKnown RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 VEGFAP15692 232 aaPredicted RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 KRT76Q01546 638 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 CXCL9Q07325 125 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 COG2Q14746 738 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 EPC1Q9H2F5 836 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 PARP2Q9UGN5 583 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 ABT1Q9ULW3 272 aaKnown RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 SERPING1P05155 500 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 C2orf54Q08AI8 447 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 PKN1Q16512 942 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 RABGGTAQ92696 567 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 ZDHHC15Q96MV8 337 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 FAM217BQ9NTX9 383 aaPredicted RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 PDE4DIPQ5VU43 2346 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 FXR1P51114 621 aaKnown RBP eCLIP12.66□□□□□ -0.38
LGR5-206ENST00000550851 BRD3Q15059 726 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 ZNF746Q6NUN9 644 aaPredicted RBP12.66□□□□□ -0.38
LGR5-206ENST00000550851 ADSSL1Q8N142 457 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 FAM149B1Q96BN6 582 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 ATG4CQ96DT6 458 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 FAM169AQ9Y6X4 670 aa12.66□□□□□ -0.38
LGR5-206ENST00000550851 NDUFAB1O14561 156 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 SLC7A5Q01650 507 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 ZBTB16Q05516 673 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 ZFPM1Q8IX07 1006 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 HIP1RO75146 1068 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 JAK3P52333 1124 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 STMN4Q9H169 189 aaPredicted RBP12.65□□□□□ -0.38
LGR5-206ENST00000550851 ADGRG1Q9Y653 693 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 PDS5AQ29RF7 1337 aaKnown RBP12.65□□□□□ -0.38
LGR5-206ENST00000550851 ABL1P00519 1130 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 ATP2A2P16615 1042 aaKnown RBP12.65□□□□□ -0.38
LGR5-206ENST00000550851 INPP5BP32019 993 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 CTNNA1P35221 906 aaKnown RBP12.65□□□□□ -0.38
LGR5-206ENST00000550851 YWHAEP62258 255 aaKnown RBP12.65□□□□□ -0.38
LGR5-206ENST00000550851 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
LGR5-206ENST00000550851 CASC4Q6P4E1 433 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 MCPH1Q8NEM0 835 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 JPH2Q9BR39 696 aaPredicted RBP12.65□□□□□ -0.38
LGR5-206ENST00000550851 REEP2Q9BRK0 252 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 AGPAT5Q9NUQ2 364 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 FBXO40Q9UH90 709 aa12.65□□□□□ -0.38
LGR5-206ENST00000550851 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
LGR5-206ENST00000550851 CLDN3O15551 220 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 IL1R1P14778 569 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 MAPK4P31152 587 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 ADCY8P40145 1251 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 SNX1Q13596 522 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 HAUS6Q7Z4H7 955 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 CCDC89Q8N998 374 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 TSNARE1Q96NA8 513 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
LGR5-206ENST00000550851 TYW1Q9NV66 732 aaKnown RBP12.64□□□□□ -0.39
LGR5-206ENST00000550851 HACL1Q9UJ83 578 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms