RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 DGKDQ16760 1214 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 KLHL40Q2TBA0 621 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 SKOR2Q2VWA4 1001 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-207ENST00000550504 NAALADL2Q58DX5 795 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 CAVIN1Q6NZI2 390 aaKnown RBP11.5□□□□□ -0.57
RAB5C-207ENST00000550504 FBXO46Q6PJ61 603 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-207ENST00000550504 GRAMD1CQ8IYS0 662 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 CEP57L1Q8IYX8 460 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 PYM1Q9BRP8 204 aaKnown RBP11.5□□□□□ -0.57
RAB5C-207ENST00000550504 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAB5C-207ENST00000550504 SPC25Q9HBM1 224 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 BLOC1S4Q9NUP1 217 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 STK17AQ9UEE5 414 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 DNM3Q9UQ16 869 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 IGSF9BQ9UPX0 1349 aa11.5□□□□□ -0.57
RAB5C-207ENST00000550504 A6NJR5 290 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 CTAGE5O15320 804 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 DKC1O60832 514 aaKnown RBP eCLIP11.49□□□□□ -0.57
RAB5C-207ENST00000550504 PPFIA4O75335 1185 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 PLA2G4BP0C869 781 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 ATP4AP20648 1035 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 MUTP22033 750 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 CPT1AP50416 773 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 GJA9P57773 515 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 CHMP4BP1P59074 171 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 MTFR1Q15390 333 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 PKN2Q16513 984 aaKnown RBP11.49□□□□□ -0.57
RAB5C-207ENST00000550504 FSCN1Q16658 493 aaKnown RBP11.49□□□□□ -0.57
RAB5C-207ENST00000550504 BRDTQ58F21 947 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-207ENST00000550504 GNASQ5JWF2 1037 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 PLA2G4FQ68DD2 849 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 C4orf19Q8IY42 314 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 LARP4BQ92615 738 aaKnown RBP11.49□□□□□ -0.57
RAB5C-207ENST00000550504 RAD54LQ92698 747 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 NACC1Q96RE7 527 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 UPF3AQ9H1J1 476 aaKnown RBP11.49□□□□□ -0.57
RAB5C-207ENST00000550504 NUP62CLQ9H1M0 184 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 CLSTN2Q9H4D0 955 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 USP25Q9UHP3 1055 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 MAFBQ9Y5Q3 323 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-207ENST00000550504 EMSYQ7Z589 1322 aa11.49□□□□□ -0.57
RAB5C-207ENST00000550504 WDR81Q562E7 1941 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 MSCO60682 206 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 ADAMTS4O75173 837 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 STBD1O95210 358 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 LYPLA2O95372 231 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 EYA4O95677 639 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 OATP04181 439 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 CCL5P13501 91 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 CASP1P29466 404 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 YWHABP31946 246 aaKnown RBP11.48□□□□□ -0.57
RAB5C-207ENST00000550504 XKR9Q5GH70 373 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 SV2BQ7L1I2 683 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 PLPPR4Q7Z2D5 763 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 AFAP1L1Q8TED9 768 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 ERCC4Q92889 916 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-207ENST00000550504 PAGE5Q96GU1 130 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 CCDC43Q96MW1 224 aaKnown RBP11.48□□□□□ -0.57
RAB5C-207ENST00000550504 TIGD1Q96MW7 591 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 RNF208Q9H0X6 261 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 BHMT2Q9H2M3 363 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 TNMDQ9H2S6 317 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 CUEDC2Q9H467 287 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 TMEM63CQ9P1W3 806 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 SEPT9Q9UHD8 586 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-207ENST00000550504 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
RAB5C-207ENST00000550504 MYH9P35579 1960 aaKnown RBP11.47□□□□□ -0.57
RAB5C-207ENST00000550504 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 H3BRB1 525 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 HOXD8P13378 290 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-207ENST00000550504 NPEPPSP55786 919 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 PLCB4Q15147 1175 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 KCNA10Q16322 511 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 MTERF2Q49AM1 385 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 XKR3Q5GH77 459 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 CCDC183Q5T5S1 534 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 LHX8Q68G74 356 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 KANK3Q6NY19 840 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 ANO5Q75V66 913 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 GPBP1Q86WP2 473 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 KCTD17Q8N5Z5 321 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 PPP1R13LQ8WUF5 828 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 SYAP1Q96A49 352 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-207ENST00000550504 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 CEP170P1Q96L14 293 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 DEFB118Q96PH6 123 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 MTRQ99707 1265 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 BLZF1Q9H2G9 400 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 RNPEPQ9H4A4 650 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 TUT1Q9H6E5 874 aaKnown RBP11.47□□□□□ -0.57
RAB5C-207ENST00000550504 MAGEF1Q9HAY2 307 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 NRBP2Q9NSY0 501 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 BMP2KQ9NSY1 1161 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-207ENST00000550504 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms