RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 ZNF654Q8IZM8 581 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 P2RX5Q93086 422 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 POP1Q99575 1024 aaKnown RBP17.26■□□□□ 0.35
SVOP-203ENST00000550436 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 KCNH6Q9H252 994 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 LY9Q9HBG7 655 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 FNDC1Q4ZHG4 1894 aaPredicted RBP17.26■□□□□ 0.35
SVOP-203ENST00000550436 TMEM221A6NGB7 291 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 M0R296 226 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 PER2O15055 1255 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 NPAS4Q8IUM7 802 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 EFHBQ8N7U6 833 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
SVOP-203ENST00000550436 VN1R2Q8NFZ6 395 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 CYP2W1Q8TAV3 490 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 PBXIP1Q96AQ6 731 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 SMARCAD1Q9H4L7 1026 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 PSTPIP2Q9H939 334 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 USP15Q9Y4E8 981 aaPredicted RBP17.25■□□□□ 0.35
SVOP-203ENST00000550436 TRPV2Q9Y5S1 764 aa17.25■□□□□ 0.35
SVOP-203ENST00000550436 KMT2EQ8IZD2 1858 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 LOC730098B7Z3J9 87 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 MGEA5O60502 916 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 MTMR1Q13613 665 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 PLCB4Q15147 1175 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 CCDC82Q8N4S0 544 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 SMRP1Q8NCR6 262 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 CTCFLQ8NI51 663 aaPredicted RBP17.24■□□□□ 0.35
SVOP-203ENST00000550436 CDHR5Q9HBB8 845 aa17.24■□□□□ 0.35
SVOP-203ENST00000550436 SLC27A2O14975 620 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 SCG2P13521 617 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 ZXDAP98168 799 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 TCF15Q12870 199 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 COASYQ13057 564 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
SVOP-203ENST00000550436 CASC1Q6TDU7 716 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 PGBD1Q96JS3 809 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 RPGRIP1Q96KN7 1286 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 CELF4Q9BZC1 486 aaKnown RBP17.23■□□□□ 0.35
SVOP-203ENST00000550436 JADE2Q9NQC1 790 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
SVOP-203ENST00000550436 PCDHA6Q9UN73 950 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 TRPC6Q9Y210 931 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 PCDHA8Q9Y5H6 950 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 MYO10Q9HD67 2058 aa17.23■□□□□ 0.35
SVOP-203ENST00000550436 ZFHX2Q9C0A1 2572 aaPredicted RBP17.23■□□□□ 0.35
SVOP-203ENST00000550436 IGSF9BQ9UPX0 1349 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 RRN3P2A6NIE6 340 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 ARP10275 920 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 ERVFC1P60507 584 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 PAK2Q13177 524 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 FAM102BQ5T8I3 360 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 IER5Q5VY09 327 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 BMP8AQ7Z5Y6 402 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 FAM86C1Q9NVL1 165 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 PCDHA2Q9Y5H9 948 aa17.22■□□□□ 0.35
SVOP-203ENST00000550436 PRC1O43663 620 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 DDAH1O94760 285 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 VCPP55072 806 aaKnown RBP17.21■□□□□ 0.35
SVOP-203ENST00000550436 ACTR2P61160 394 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
SVOP-203ENST00000550436 CBX2Q14781 532 aaPredicted RBP17.21■□□□□ 0.35
SVOP-203ENST00000550436 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 NAALADL2Q58DX5 795 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 MICAL1Q8TDZ2 1067 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 TMEM40Q8WWA1 233 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 CDHR1Q96JP9 859 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 PPP1R16BQ96T49 567 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 APOL5Q9BWW9 433 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 TLE6Q9H808 572 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 JPH1Q9HDC5 661 aaPredicted RBP17.21■□□□□ 0.35
SVOP-203ENST00000550436 KCNH7Q9NS40 1196 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 SLC9A2Q9UBY0 812 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
SVOP-203ENST00000550436 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
SVOP-203ENST00000550436 SH2B2O14492 632 aaPredicted RBP17.2■□□□□ 0.34
SVOP-203ENST00000550436 STAG3L1P0CL83 205 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 SMARCA1P28370 1054 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 KIF5BP33176 963 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 ITGB3BPQ13352 177 aaPredicted RBP17.2■□□□□ 0.34
SVOP-203ENST00000550436 MTHFD1LQ6UB35 978 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 MAP3K14Q99558 947 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 FTHL17Q9BXU8 183 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 CDH22Q9UJ99 828 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 SQORQ9Y6N5 450 aa17.2■□□□□ 0.34
SVOP-203ENST00000550436 PTPRZ1P23471 2315 aaPredicted RBP17.19■□□□□ 0.34
SVOP-203ENST00000550436 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
SVOP-203ENST00000550436 TBKBP1A7MCY6 615 aa17.19■□□□□ 0.34
SVOP-203ENST00000550436 SP100P23497 879 aaPredicted RBP17.19■□□□□ 0.34
SVOP-203ENST00000550436 STAT5BP51692 787 aa17.19■□□□□ 0.34
SVOP-203ENST00000550436 KRT76Q01546 638 aa17.19■□□□□ 0.34
SVOP-203ENST00000550436 SPOUT1Q5T280 376 aaKnown RBP17.19■□□□□ 0.34
SVOP-203ENST00000550436 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
SVOP-203ENST00000550436 NFXL1Q6ZNB6 911 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms