RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PCDHA7Q9UN72 937 aa14.64□□□□□ -0.07
RAB5C-206ENST00000550406 LOXHD1Q8IVV2 1947 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 POTEB3A0JP26 581 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 ZBTB42B2RXF5 422 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 RPA1P27694 616 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 LONP1P36776 959 aaKnown RBP14.63□□□□□ -0.07
RAB5C-206ENST00000550406 SLC26A2P50443 739 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 ADAM17P78536 824 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 ZNF200P98182 395 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-206ENST00000550406 PRKCEQ02156 737 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 POTEBQ6S5H4 581 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 TRMT1LQ7Z2T5 733 aaKnown RBP14.63□□□□□ -0.07
RAB5C-206ENST00000550406 SESTD1Q86VW0 696 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 C4orf19Q8IY42 314 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
RAB5C-206ENST00000550406 ATP8B4Q8TF62 1192 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 LRRC15Q8TF66 581 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 EPSTI1Q96J88 318 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 PNMA5Q96PV4 448 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 CTAGE1Q96RT6 745 aa14.63□□□□□ -0.07
RAB5C-206ENST00000550406 CUTAO60888 179 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 LYPLA2O95372 231 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 OATP04181 439 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 INSRRP14616 1297 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 NCLP19338 710 aaKnown RBP14.62□□□□□ -0.07
RAB5C-206ENST00000550406 CCT6AP40227 531 aaKnown RBP14.62□□□□□ -0.07
RAB5C-206ENST00000550406 GRB10Q13322 594 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 HYIQ5T013 277 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 MARCH8Q5T0T0 291 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 GDF6Q6KF10 455 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-206ENST00000550406 ANO5Q75V66 913 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 NEK9Q8TD19 979 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 KCNG4Q8TDN1 519 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 TRAPPC12Q8WVT3 735 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-206ENST00000550406 ZBTB10Q96DT7 871 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 AK8Q96MA6 479 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 NIFKQ9BYG3 293 aaKnown RBP14.62□□□□□ -0.07
RAB5C-206ENST00000550406 ZSWIM4Q9H7M6 989 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 TUFT1Q9NNX1 390 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 SETD4Q9NVD3 440 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 GTF2IRD1Q9UHL9 959 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 ZNF215Q9UL58 517 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-206ENST00000550406 DNAH12Q6ZR08 3092 aa14.62□□□□□ -0.07
RAB5C-206ENST00000550406 DDX11L8A8MPP1 907 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 HBP1O60381 514 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 B4GALT4O60513 344 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 CD4P01730 458 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 RTP1P59025 263 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 PTPN11Q06124 597 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-206ENST00000550406 TARBP2Q15633 366 aaKnown RBP14.61□□□□□ -0.07
RAB5C-206ENST00000550406 TRIM60Q495X7 471 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 POTEGQ6S5H5 508 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 SHC4Q6S5L8 630 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 ANKRD33Q7Z3H0 272 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 KCNK18Q7Z418 384 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 CABP7Q86V35 215 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 FAM126BQ8IXS8 530 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 ERMNQ8TAM6 284 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 SNX29Q8TEQ0 813 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 SYMPKQ92797 1274 aaKnown RBP14.61□□□□□ -0.07
RAB5C-206ENST00000550406 ATP6V0A1Q93050 837 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 SPATA32Q96LK8 384 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 RAB34Q9BZG1 259 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 CCSER1Q9C0I3 900 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 SCAND2PQ9GZW5 306 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-206ENST00000550406 TRPV6Q9H1D0 765 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 NRBP2Q9NSY0 501 aa14.61□□□□□ -0.07
RAB5C-206ENST00000550406 TRMT13Q9NUP7 481 aaKnown RBP14.61□□□□□ -0.07
RAB5C-206ENST00000550406 A0A087X0B3 334 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 RGS19P49795 217 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 NPEPPSP55786 919 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 TLE2Q04725 743 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 PPFIA1Q13136 1202 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 GRIK4Q16099 956 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 TMEM119Q4V9L6 283 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 XKR3Q5GH77 459 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 FAM47CQ5HY64 1035 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 PLA2G4FQ68DD2 849 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 C7orf31Q8N865 590 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 PIGOQ8TEQ8 1089 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 LMBR1Q8WVP7 490 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 FAM167AQ96KS9 214 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 PLIN2Q99541 437 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 SEZ6LQ9BYH1 1024 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 KIAA1024Q9UPX6 916 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 TRPC6Q9Y210 931 aa14.6□□□□□ -0.07
RAB5C-206ENST00000550406 MBLAC1A4D2B0 266 aaPredicted RBP14.59□□□□□ -0.07
RAB5C-206ENST00000550406 E9PMD0 336 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 RBAK-RBAKDNI3L0D1 243 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 TREHO43280 583 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 DKC1O60832 514 aaKnown RBP eCLIP14.59□□□□□ -0.07
RAB5C-206ENST00000550406 XRCC6P12956 609 aaKnown RBP eCLIP14.59□□□□□ -0.07
RAB5C-206ENST00000550406 MUTP22033 750 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 YWHABP31946 246 aaKnown RBP14.59□□□□□ -0.07
RAB5C-206ENST00000550406 UBA7P41226 1012 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 ME1P48163 572 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms