RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 DCPSQ96C86 337 aaKnown RBP23.11■■□□□ 1.29
PRDM4-205ENST00000550376 ASTN1O14525 1302 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 CETN3O15182 167 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 AKAP3O75969 853 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 GHRHRQ02643 423 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 FSTL1Q12841 308 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 ZNF569Q5MCW4 686 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 ODR4Q5SWX8 454 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 TEX2Q8IWB9 1127 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 SULF1Q8IWU6 871 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 PARVGQ9HBI0 331 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 PHLPP2Q6ZVD8 1323 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 HIP1RO75146 1068 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 TRIM59Q8IWR1 403 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 NUP58Q9BVL2 599 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 R3HDMLQ9H3Y0 253 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 NHEJ1Q9H9Q4 299 aaPredicted RBP23.1■■□□□ 1.29
PRDM4-205ENST00000550376 ELP3Q9H9T3 547 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 A1CFQ9NQ94 594 aaKnown RBP23.1■■□□□ 1.29
PRDM4-205ENST00000550376 ADARB2Q9NS39 739 aaKnown RBP23.1■■□□□ 1.29
PRDM4-205ENST00000550376 PCDHB13Q9Y5F0 798 aa23.1■■□□□ 1.29
PRDM4-205ENST00000550376 TGFB1I1O43294 461 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 TFRCP02786 760 aaKnown RBP23.09■■□□□ 1.29
PRDM4-205ENST00000550376 ARHGAP29Q52LW3 1261 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 PADI6Q6TGC4 694 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 DAW1Q8N136 415 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 C12orf42Q96LP6 360 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 CEP63Q96MT8 703 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 FIZ1Q96SL8 496 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 ADAMTS5Q9UNA0 930 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 RGS20O76081 388 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 P4HBP07237 508 aaKnown RBP23.09■■□□□ 1.29
PRDM4-205ENST00000550376 ARHGAP25P42331 645 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 MAP3K9P80192 1104 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 PLA2G4FQ68DD2 849 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 L2HGDHQ9H9P8 463 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 GUCA1BQ9UMX6 200 aa23.09■■□□□ 1.29
PRDM4-205ENST00000550376 LRRC53A6NM62 1247 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 KIF20AO95235 890 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 SLU7O95391 586 aaKnown RBP23.08■■□□□ 1.29
PRDM4-205ENST00000550376 NPEPPSP55786 919 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 VSIG10LQ86VR7 867 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 FAM178BQ8IXR5 827 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 OTUD5Q96G74 571 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 GPRC5CQ9NQ84 441 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 COL11A1P12107 1806 aaPredicted RBP23.08■■□□□ 1.29
PRDM4-205ENST00000550376 GOLGA6L9A6NEM1 432 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 USO1O60763 962 aaKnown RBP23.08■■□□□ 1.29
PRDM4-205ENST00000550376 NR3C1P04150 777 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 HERVK_113P62684 666 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 KCNH2Q12809 1159 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 DCAF17Q5H9S7 520 aaPredicted RBP23.08■■□□□ 1.29
PRDM4-205ENST00000550376 RETREG2Q8NC44 543 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 TEX13BQ9BXU2 312 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 ZSWIM4Q9H7M6 989 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 CYP39A1Q9NYL5 469 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 TRAF3IP3Q9Y228 551 aa23.08■■□□□ 1.29
PRDM4-205ENST00000550376 RCCD1A6NED2 376 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 TULP1O00294 542 aaPredicted RBP23.07■■□□□ 1.28
PRDM4-205ENST00000550376 IRF6O14896 467 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 ACTN1P12814 892 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 CNTN2Q02246 1040 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 ENOX2Q16206 610 aaKnown RBP23.07■■□□□ 1.28
PRDM4-205ENST00000550376 MEA1Q16626 185 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 ZNF397Q8NF99 534 aaPredicted RBP23.07■■□□□ 1.28
PRDM4-205ENST00000550376 LSM14BQ9BX40 385 aaKnown RBP23.07■■□□□ 1.28
PRDM4-205ENST00000550376 ZNHIT6Q9NWK9 470 aaKnown RBP23.07■■□□□ 1.28
PRDM4-205ENST00000550376 DUSP10Q9Y6W6 482 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 RLFQ13129 1914 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 FRMPD4Q14CM0 1322 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 TISP43B9A030 160 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 QARSP47897 775 aaKnown RBP23.07■■□□□ 1.28
PRDM4-205ENST00000550376 EDRF1Q3B7T1 1238 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 TCERG1LQ5VWI1 586 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 GADL1Q6ZQY3 521 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 ZNF720Q7Z2F6 126 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 PPP2R3BQ9Y5P8 575 aa23.07■■□□□ 1.28
PRDM4-205ENST00000550376 RBBP6Q7Z6E9 1792 aaKnown RBP23.07■■□□□ 1.28
PRDM4-205ENST00000550376 NOL4O94818 638 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 SBF1O95248 1867 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 MAPK7Q13164 816 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 NIPA1Q7RTP0 329 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 NEK11Q8NG66 645 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 CARD6Q9BX69 1037 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 OLFML3Q9NRN5 406 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 HOXC10Q9NYD6 342 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 ZMYM2Q9UBW7 1377 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 PDXKO00764 312 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 ARID5AQ03989 594 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 TTLL12Q14166 644 aaPredicted RBP23.06■■□□□ 1.28
PRDM4-205ENST00000550376 ELF2Q15723 593 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 ERCC6LQ2NKX8 1250 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 CACNA2D4Q7Z3S7 1137 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 SLC35F6Q8N357 371 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 ARHGAP20Q9P2F6 1191 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 TCEAL9Q9UHQ7 104 aa23.06■■□□□ 1.28
PRDM4-205ENST00000550376 KIF5CO60282 957 aa23.05■■□□□ 1.28
PRDM4-205ENST00000550376 YWHABP31946 246 aaKnown RBP23.05■■□□□ 1.28
PRDM4-205ENST00000550376 RARRES1P49788 294 aa23.05■■□□□ 1.28
PRDM4-205ENST00000550376 SOX10P56693 466 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms