RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 SEZ6LQ9BYH1 1024 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 BRMS1Q9HCU9 246 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 IL23AQ9NPF7 189 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 RGL1Q9NZL6 768 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 SMC3Q9UQE7 1217 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 NOD1Q9Y239 953 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 PCDHB6Q9Y5E3 794 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 PCDHA10Q9Y5I2 948 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 WDR81Q562E7 1941 aa12.66□□□□□ -0.38
RAB5B-208ENST00000550283 WDR64B1ANS9 1081 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 K7ELQ4 463 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-208ENST00000550283 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 CHRNA1P02708 482 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 GCFC2P16383 781 aaKnown RBP12.65□□□□□ -0.38
RAB5B-208ENST00000550283 THPOP40225 353 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 PRKCEQ02156 737 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 PPP2R5CQ13362 524 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 IL17AQ16552 155 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 RASIP1Q5U651 963 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 MIS18BP1Q6P0N0 1132 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 LRRC8DQ7L1W4 858 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 OTOP2Q7RTS6 562 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 MIER3Q7Z3K6 550 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 ATP8B4Q8TF62 1192 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 DNAJB3Q8WWF6 145 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 AZI2Q9H6S1 392 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 SAMM50Q9Y512 469 aa12.65□□□□□ -0.38
RAB5B-208ENST00000550283 NRCAMQ92823 1304 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 POTEMA6NI47 508 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 C22orf31O95567 290 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 PSAPP07602 524 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 SELPP16109 830 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 MGAT3Q09327 533 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 TMEM62Q0P6H9 643 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 DRP2Q13474 957 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 CALCRLQ16602 461 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 TTC38Q5R3I4 469 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 FAM173BQ6P4H8 233 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 TMCO2Q7Z6W1 182 aaPredicted RBP12.64□□□□□ -0.39
RAB5B-208ENST00000550283 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
RAB5B-208ENST00000550283 TMEM199Q8N511 208 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 SNX21Q969T3 373 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 FAM49AQ9H0Q0 323 aaPredicted RBP12.64□□□□□ -0.39
RAB5B-208ENST00000550283 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
RAB5B-208ENST00000550283 NEMFO60524 1076 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 KLRC1P26715 233 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 TXKP42681 527 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 CYP4A11Q02928 519 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.394e-7■□□□□ 11.3
RAB5B-208ENST00000550283 SAFBQ15424 915 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAB5B-208ENST00000550283 TARBP2Q15633 366 aaKnown RBP12.63□□□□□ -0.39
RAB5B-208ENST00000550283 FAM160B1Q5W0V3 765 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 LARP1BQ659C4 914 aaKnown RBP12.63□□□□□ -0.39
RAB5B-208ENST00000550283 MCTP1Q6DN14 999 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 NCAPH2Q6IBW4 605 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 MTHFD1LQ6UB35 978 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 ANO5Q75V66 913 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 LINC01465Q8N7H1 131 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 CAGE1Q8TC20 777 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 DYDC2Q96IM9 177 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 ZNF668Q96K58 619 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-208ENST00000550283 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
RAB5B-208ENST00000550283 FTOQ9C0B1 505 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAB5B-208ENST00000550283 PTPRSQ13332 1948 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 A0A1W2PPC1 479 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 TBX3O15119 743 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 HBP1O60381 514 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 ARHGEF15O94989 841 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 CXCL10P02778 98 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 OATP04181 439 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 PBX2P40425 430 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 CLCN3P51790 818 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 JAK3P52333 1124 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 NPEPPSP55786 919 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 BFSP2Q13515 415 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 CTTNQ14247 550 aaKnown RBP12.62□□□□□ -0.39
RAB5B-208ENST00000550283 LRIT3Q3SXY7 679 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 Q7L0L9 218 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 CKAP2LQ8IYA6 745 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 KIAA0319LQ8IZA0 1049 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 LRRC71Q8N4P6 559 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 HERVK_113Q902F9 699 aa12.62□□□□□ -0.39
RAB5B-208ENST00000550283 RNPC3Q96LT9 517 aaKnown RBP12.62□□□□□ -0.39
RAB5B-208ENST00000550283 TTC12Q9H892 705 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-208ENST00000550283 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-208ENST00000550283 CHD7Q9P2D1 2997 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 PP2D1A8MPX8 630 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 SLITRK3O94933 977 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 FGBP02675 491 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 SPATA31C1P0DKV0 1188 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms