RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TRIM71Q2Q1W2 868 aaKnown RBP25.32■■□□□ 1.64
BRF1-216ENST00000550208 MFSD5Q6N075 450 aa25.32■■□□□ 1.64
BRF1-216ENST00000550208 FAM173BQ6P4H8 233 aa25.32■■□□□ 1.64
BRF1-216ENST00000550208 DYDC2Q96IM9 177 aa25.32■■□□□ 1.64
BRF1-216ENST00000550208 WNT8AQ9H1J5 351 aa25.32■■□□□ 1.64
BRF1-216ENST00000550208 RGL1Q9NZL6 768 aa25.32■■□□□ 1.64
BRF1-216ENST00000550208 OATP04181 439 aa25.31■■□□□ 1.64
BRF1-216ENST00000550208 PSMC5P62195 406 aa25.31■■□□□ 1.64
BRF1-216ENST00000550208 PRKCEQ02156 737 aa25.31■■□□□ 1.64
BRF1-216ENST00000550208 ZNF484Q5JVG2 852 aa25.31■■□□□ 1.64
BRF1-216ENST00000550208 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
BRF1-216ENST00000550208 RUFY4Q6ZNE9 571 aa25.31■■□□□ 1.64
BRF1-216ENST00000550208 RETREG2Q8NC44 543 aa25.31■■□□□ 1.64
BRF1-216ENST00000550208 EIF2AK1Q9BQI3 630 aaKnown RBP25.31■■□□□ 1.64
BRF1-216ENST00000550208 MBLAC1A4D2B0 266 aaPredicted RBP25.3■■□□□ 1.64
BRF1-216ENST00000550208 POTEMA6NI47 508 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 ZBTB42B2RXF5 422 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 SLITRK3O94933 977 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 QARSP47897 775 aaKnown RBP25.3■■□□□ 1.64
BRF1-216ENST00000550208 CTTNQ14247 550 aaKnown RBP25.3■■□□□ 1.64
BRF1-216ENST00000550208 IL17AQ16552 155 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 FOXD4L5Q5VV16 416 aaPredicted RBP25.3■■□□□ 1.64
BRF1-216ENST00000550208 CAGE1Q8TC20 777 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 FOXD4L4Q8WXT5 416 aaPredicted RBP25.3■■□□□ 1.64
BRF1-216ENST00000550208 SCLYQ96I15 445 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 FAM167AQ96KS9 214 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 WRAP73Q9P2S5 460 aaPredicted RBP25.3■■□□□ 1.64
BRF1-216ENST00000550208 TUBE1Q9UJT0 475 aa25.3■■□□□ 1.64
BRF1-216ENST00000550208 LTBP2Q14767 1821 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 DDX11L8A8MPP1 907 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 CKBP12277 381 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 CSF2RAP15509 400 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 KLRC1P26715 233 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 MTHFD1LQ6UB35 978 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 TMEM199Q8N511 208 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 CCDC155Q8N6L0 562 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 HSD17B14Q9BPX1 270 aa25.29■■□□□ 1.64
BRF1-216ENST00000550208 ZSCAN16Q9H4T2 348 aaPredicted RBP25.29■■□□□ 1.64
BRF1-216ENST00000550208 TMEM150BA6NC51 233 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 LAD1O00515 517 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 PITPNM1O00562 1244 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 IQCF3P0C7M6 154 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 THPOP40225 353 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 EPHB4P54760 987 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 ATP2C1P98194 919 aaPredicted RBP25.28■■□□□ 1.64
BRF1-216ENST00000550208 CYP4A11Q02928 519 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 FPGSQ05932 587 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 PKP1Q13835 747 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 XKR3Q5GH77 459 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 TPH2Q8IWU9 490 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 NIFKQ9BYG3 293 aaKnown RBP25.28■■□□□ 1.64
BRF1-216ENST00000550208 PRO3102Q9H379 93 aa25.28■■□□□ 1.64
BRF1-216ENST00000550208 COLQQ9Y215 455 aaPredicted RBP25.28■■□□□ 1.64
BRF1-216ENST00000550208 RBAK-RBAKDNI3L0D1 243 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 PDIA4P13667 645 aaKnown RBP25.27■■□□□ 1.64
BRF1-216ENST00000550208 PRPHP41219 470 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 FXR2P51116 673 aaKnown RBP eCLIP25.27■■□□□ 1.64
BRF1-216ENST00000550208 RBL2Q08999 1139 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 SF3A1Q15459 793 aaKnown RBP25.27■■□□□ 1.64
BRF1-216ENST00000550208 TMEM266Q2M3C6 531 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 ZNF618Q5T7W0 954 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 LXNQ9BS40 222 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 UBE2OQ9C0C9 1292 aaKnown RBP25.27■■□□□ 1.64
BRF1-216ENST00000550208 PCDHA2Q9Y5H9 948 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 CLIC4Q9Y696 253 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 COL1A2P08123 1366 aa25.27■■□□□ 1.64
BRF1-216ENST00000550208 ZBTB39O15060 712 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 DKC1O60832 514 aaKnown RBP eCLIP25.26■■□□□ 1.63
BRF1-216ENST00000550208 ZSCAN22P10073 491 aaPredicted RBP25.26■■□□□ 1.63
BRF1-216ENST00000550208 SELPP16109 830 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 BMP8BP34820 402 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 PDIA5Q14554 519 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 TRAF7Q6Q0C0 670 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 DTHD1Q6ZMT9 781 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 ANO5Q75V66 913 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 C16orf59Q7L2K0 433 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 C4orf19Q8IY42 314 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 DNAJB3Q8WWF6 145 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 SH2D3AQ9BRG2 576 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 FTOQ9C0B1 505 aaKnown RBP eCLIP25.26■■□□□ 1.63
BRF1-216ENST00000550208 ZSWIM4Q9H7M6 989 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 SEPT9Q9UHD8 586 aaPredicted RBP25.26■■□□□ 1.63
BRF1-216ENST00000550208 CEP131Q9UPN4 1083 aa25.26■■□□□ 1.63
BRF1-216ENST00000550208 ACRP10323 421 aa25.25■■□□□ 1.63
BRF1-216ENST00000550208 TARBP2Q15633 366 aaKnown RBP25.25■■□□□ 1.63
BRF1-216ENST00000550208 MTERF2Q49AM1 385 aa25.25■■□□□ 1.63
BRF1-216ENST00000550208 TAF2Q6P1X5 1199 aa25.25■■□□□ 1.63
BRF1-216ENST00000550208 LRRC8DQ7L1W4 858 aa25.25■■□□□ 1.63
BRF1-216ENST00000550208 VWCEQ96DN2 955 aa25.25■■□□□ 1.63
BRF1-216ENST00000550208 FAM49AQ9H0Q0 323 aaPredicted RBP25.25■■□□□ 1.63
BRF1-216ENST00000550208 LRWD1Q9UFC0 647 aa25.25■■□□□ 1.63
BRF1-216ENST00000550208 A0A087WWV3 80 aa25.24■■□□□ 1.63
BRF1-216ENST00000550208 MED24O75448 989 aa25.24■■□□□ 1.63
BRF1-216ENST00000550208 C22orf31O95567 290 aa25.24■■□□□ 1.63
BRF1-216ENST00000550208 SPATA31C1P0DKV0 1188 aa25.24■■□□□ 1.63
BRF1-216ENST00000550208 PPIGQ13427 754 aaKnown RBP eCLIP25.24■■□□□ 1.634e-6■■□□□ 13.6
BRF1-216ENST00000550208 GPNMBQ14956 572 aa25.24■■□□□ 1.63
BRF1-216ENST00000550208 PLA2G4FQ68DD2 849 aa25.24■■□□□ 1.63
BRF1-216ENST00000550208 ZNF579Q8NAF0 562 aaKnown RBP25.24■■□□□ 1.63
BRF1-216ENST00000550208 NEK9Q8TD19 979 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms