RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SPECC1Q5M775 1068 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 C1orf210Q8IVY1 113 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 GPR161Q8N6U8 529 aaKnown RBP16.23■□□□□ 0.19
PTCH1-217ENST00000548420 NECTIN4Q96NY8 510 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 TMEM47Q9BQJ4 181 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 AAASQ9NRG9 546 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
PTCH1-217ENST00000548420 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 FBXL21Q9UKT6 434 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 ANGPTL2Q9UKU9 493 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 KINO60870 393 aaKnown RBP16.22■□□□□ 0.19
PTCH1-217ENST00000548420 PMLP29590 882 aa16.22■□□□□ 0.19
PTCH1-217ENST00000548420 UBE3AQ05086 875 aa16.22■□□□□ 0.19
PTCH1-217ENST00000548420 TDGQ13569 410 aa16.22■□□□□ 0.19
PTCH1-217ENST00000548420 PLPP4Q5VZY2 271 aa16.22■□□□□ 0.19
PTCH1-217ENST00000548420 DGKHQ86XP1 1220 aa16.22■□□□□ 0.19
PTCH1-217ENST00000548420 TBC1D5Q92609 795 aa16.22■□□□□ 0.19
PTCH1-217ENST00000548420 MPHOSPH6Q99547 160 aaKnown RBP16.22■□□□□ 0.19
PTCH1-217ENST00000548420 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
PTCH1-217ENST00000548420 IGF2RP11717 2491 aa16.22■□□□□ 0.19
PTCH1-217ENST00000548420 DENND4AQ7Z401 1863 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 FSD2A1L4K1 749 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 STK25O00506 426 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 PPFIA4O75335 1185 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 FGF18O76093 207 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 CENPBP07199 599 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-217ENST00000548420 PROS1P07225 676 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 CYP21A2P08686 494 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 SRGAP2BP0DMP2 458 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 GLULP15104 373 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 TBC1D8BQ0IIM8 1120 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 PLCD3Q8N3E9 789 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 C12orf76Q8N812 135 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-217ENST00000548420 TAAR1Q96RJ0 339 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 KRT23Q9C075 422 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 CNNM2Q9H8M5 875 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 COL20A1Q9P218 1284 aa16.21■□□□□ 0.19
PTCH1-217ENST00000548420 B4E1Z4 1266 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 ADAM17P78536 824 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 ITIH3Q06033 890 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 MGAT3Q09327 533 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 CCDC178Q5BJE1 867 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 CES5AQ6NT32 575 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 BTNL9Q6UXG8 535 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 DCAF4Q8WV16 495 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 LSG1Q9H089 658 aaKnown RBP16.2■□□□□ 0.18
PTCH1-217ENST00000548420 CYP26B1Q9NR63 512 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 SETD4Q9NVD3 440 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 ZMIZ1Q9ULJ6 1067 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 USP18Q9UMW8 372 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 MTMR7Q9Y216 660 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 USTQ9Y2C2 406 aa16.2■□□□□ 0.18
PTCH1-217ENST00000548420 SLC30A4O14863 429 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 EOMESO95936 686 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 CFHP08603 1231 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 MTHFRP42898 656 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 IQCA1Q86XH1 822 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 AGO3Q9H9G7 860 aaKnown RBP16.19■□□□□ 0.18
PTCH1-217ENST00000548420 TBC1D17Q9HA65 648 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 KCNK12Q9HB15 430 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 TMEM260Q9NX78 707 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 PPP4R2Q9NY27 417 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 HCFC2Q9Y5Z7 792 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 TAF6LQ9Y6J9 622 aa16.19■□□□□ 0.18
PTCH1-217ENST00000548420 NBEAQ8NFP9 2946 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 FNDC1Q4ZHG4 1894 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-217ENST00000548420 CYSRT1A8MQ03 144 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 PDHBP11177 359 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 SHC2P98077 582 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 RARS2Q5T160 578 aaKnown RBP16.18■□□□□ 0.18
PTCH1-217ENST00000548420 SYDE2Q5VT97 1194 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 PDE12Q6L8Q7 609 aaKnown RBP16.18■□□□□ 0.18
PTCH1-217ENST00000548420 NPAS4Q8IUM7 802 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 ENAHQ8N8S7 591 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-217ENST00000548420 CASP10Q92851 521 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 ZSCAN10Q96SZ4 725 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-217ENST00000548420 ZKSCAN3Q9BRR0 538 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 BCAS3Q9H6U6 928 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 WNT16Q9UBV4 365 aa16.18■□□□□ 0.18
PTCH1-217ENST00000548420 RBM8AQ9Y5S9 174 aaKnown RBP16.18■□□□□ 0.18
PTCH1-217ENST00000548420 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.18■□□□□ 0.18
PTCH1-217ENST00000548420 B4DLN1 442 aa16.17■□□□□ 0.18
PTCH1-217ENST00000548420 H3BRB1 525 aa16.17■□□□□ 0.18
PTCH1-217ENST00000548420 LRRN2O75325 713 aa16.17■□□□□ 0.18
PTCH1-217ENST00000548420 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
PTCH1-217ENST00000548420 SP2Q02086 613 aa16.17■□□□□ 0.18
PTCH1-217ENST00000548420 SEC23AQ15436 765 aa16.17■□□□□ 0.18
PTCH1-217ENST00000548420 N4BP2L1Q5TBK1 243 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-217ENST00000548420 RUFY4Q6ZNE9 571 aa16.17■□□□□ 0.18
PTCH1-217ENST00000548420 TUT1Q9H6E5 874 aaKnown RBP16.17■□□□□ 0.18
PTCH1-217ENST00000548420 DBR1Q9UK59 544 aaKnown RBP16.17■□□□□ 0.18
PTCH1-217ENST00000548420 CA14Q9ULX7 337 aa16.17■□□□□ 0.18
PTCH1-217ENST00000548420 C1QTNF9BB2RNN3 333 aa16.16■□□□□ 0.18
PTCH1-217ENST00000548420 E7EWF7 191 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms