RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 GBP4Q96PP9 640 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 YIPF4Q9BSR8 244 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 SLC13A1Q9BZW2 595 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 BCAS3Q9H6U6 928 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 C14orf119Q9NWQ9 140 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 G3BP2Q9UN86 482 aaKnown RBP5.55□□□□□ -1.52
PTCH1-216ENST00000548379 WASF3Q9UPY6 502 aa5.55□□□□□ -1.52
PTCH1-216ENST00000548379 PEX10O60683 326 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 CACNB2Q08289 660 aaPredicted RBP5.54□□□□□ -1.52
PTCH1-216ENST00000548379 RGL3Q3MIN7 710 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 OLFML2BQ68BL8 750 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 TMC6Q7Z403 805 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 CILP2Q8IUL8 1156 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 RTF1Q92541 710 aaKnown RBP5.54□□□□□ -1.52
PTCH1-216ENST00000548379 ALG3Q92685 438 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 CHMP4CQ96CF2 233 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 RNF38Q9H0F5 515 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 SEMA4AQ9H3S1 761 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 NGRNQ9NPE2 291 aaKnown RBP5.54□□□□□ -1.52
PTCH1-216ENST00000548379 CHPF2Q9P2E5 772 aa5.54□□□□□ -1.52
PTCH1-216ENST00000548379 NOC2LQ9Y3T9 749 aaKnown RBP5.54□□□□□ -1.52
PTCH1-216ENST00000548379 ERCC6Q03468 1493 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 MYOCOSA0A1B0GUC4 107 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 SHTN1A0MZ66 631 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 LCHNA4D1U4 455 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 ZNF839A8K0R7 811 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 AKAP10O43572 662 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 KDM1AO60341 852 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 C8BP07358 591 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 TMEM253P0C7T8 217 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 RBP3P10745 1247 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 IARSP41252 1262 aaKnown RBP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 STAT5AP42229 794 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 GPR3P46089 330 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 ZNF200P98182 395 aaPredicted RBP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 CMIPQ8IY22 773 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 C1orf162Q8NEQ5 155 aaPredicted RBP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 FAM168AQ92567 244 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 LIN37Q96GY3 246 aaPredicted RBP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 FUBP3Q96I24 572 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 CAMKK2Q96RR4 588 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 SMAD5Q99717 465 aaKnown RBP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 FOXB1Q99853 325 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 CNTD2Q9H8S5 307 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 TCF7L1Q9HCS4 588 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 MSRAQ9UJ68 235 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 PCDHA5Q9Y5H7 936 aa5.53□□□□□ -1.52
PTCH1-216ENST00000548379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
PTCH1-216ENST00000548379 CUX2O14529 1486 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 E2F8A0AVK6 867 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 ABLIM3O94929 683 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 PRLP01236 227 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 NCAM1P13591 858 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 PTGS1P23219 599 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 IGFBP6P24592 240 aaPredicted RBP5.52□□□□□ -1.53
PTCH1-216ENST00000548379 RAB27AP51159 221 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 MANFP55145 182 aaKnown RBP5.52□□□□□ -1.53
PTCH1-216ENST00000548379 ALDH6A1Q02252 535 aaKnown RBP5.52□□□□□ -1.53
PTCH1-216ENST00000548379 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 LIPIQ6XZB0 460 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 KANSL1Q7Z3B3 1105 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 CXorf67Q86X51 503 aaPredicted RBP5.52□□□□□ -1.53
PTCH1-216ENST00000548379 PHYKPLQ8IUZ5 450 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 FAM26EQ8N5C1 309 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 E2F7Q96AV8 911 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 HOOK2Q96ED9 719 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 MAML3Q96JK9 1138 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 ACAP3Q96P50 834 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 AMNQ9BXJ7 453 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 CDH19Q9H159 772 aa5.52□□□□□ -1.53
PTCH1-216ENST00000548379 MBD1Q9UIS9 605 aaPredicted RBP5.52□□□□□ -1.53
PTCH1-216ENST00000548379 WASHC2AQ641Q2 1341 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 UBA6A0AVT1 1052 aaPredicted RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 PRAMEF22A3QJZ6 481 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 ELL2O00472 640 aaPredicted RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 NFIBO00712 420 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 MAFO75444 373 aaPredicted RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 ENO2P09104 434 aaPredicted RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 ATF2P15336 505 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 MC4RP32245 332 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 NKX3-2P78367 333 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 SRSF3P84103 164 aaKnown RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 PIN1Q13526 163 aaPredicted RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 MYBPC3Q14896 1274 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 FSCN1Q16658 493 aaKnown RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 TTC38Q5R3I4 469 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 ZBTB41Q5SVQ8 909 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 XP32Q5T750 250 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 PRAMEF18Q5VWM3 479 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 B3GNT8Q7Z7M8 397 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 ZNF605Q86T29 641 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 ZBTB46Q86UZ6 589 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 LDHDQ86WU2 507 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 DTX3Q8N9I9 347 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 IGDCC4Q8TDY8 1250 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 FAXDC2Q96IV6 333 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 RTFDC1Q9BY42 306 aaPredicted RBP5.51□□□□□ -1.53
PTCH1-216ENST00000548379 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms