RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 TLR1Q15399 786 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 WASHC4Q2M389 1173 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 INTS6LQ5JSJ4 861 aaKnown RBP0.5□□□□□ -2.33
CEP290-203ENST00000547691 ZNF746Q6NUN9 644 aaPredicted RBP0.5□□□□□ -2.33
CEP290-203ENST00000547691 PDXDC2PQ6P474 469 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 PCSK4Q6UW60 755 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 MAMDC4Q6UXC1 1216 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 FASTKD5Q7L8L6 764 aaKnown RBP0.5□□□□□ -2.33
CEP290-203ENST00000547691 PPP1R42Q7Z4L9 355 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 NLRP10Q86W26 655 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 CERS5Q8N5B7 392 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 MAGEB6Q8N7X4 407 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 RASGRP4Q8TDF6 673 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 ASB11Q8WXH4 323 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 MRPL38Q96DV4 380 aaKnown RBP0.5□□□□□ -2.33
CEP290-203ENST00000547691 RNPC3Q96LT9 517 aaKnown RBP0.5□□□□□ -2.33
CEP290-203ENST00000547691 UBL7Q96S82 380 aaPredicted RBP0.5□□□□□ -2.33
CEP290-203ENST00000547691 BUD13Q9BRD0 619 aaKnown RBP eCLIP0.5□□□□□ -2.33
CEP290-203ENST00000547691 WDR18Q9BV38 432 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 BCL2L13Q9BXK5 485 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 DEFB129Q9H1M3 183 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 NKX2-4Q9H2Z4 354 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 PRORYQ9H606 182 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 FRRS1LQ9P0K9 344 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 FAM50BQ9Y247 325 aa0.5□□□□□ -2.33
CEP290-203ENST00000547691 REXO2Q9Y3B8 237 aaKnown RBP0.5□□□□□ -2.33
CEP290-203ENST00000547691 FANCIQ9NVI1 1328 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 NYNRINQ9P2P1 1898 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 PLXNB3Q9ULL4 1909 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 MTCL1Q9Y4B5 1905 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 ST20-MTHFSA0A0A6YYL1 179 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 LOC102724159A0A0B4J2E5 919 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 IGKV6D-41A0A0C4DH26 115 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 H3BNC9 293 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 MASP2O00187 686 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 TBC1D4O60343 1298 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PARNO95453 639 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 RNASE1P07998 156 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 SNRPA1P09661 255 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 ARL14EPLP0DKL9 152 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 AOC1P19801 751 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 BMP5P22003 454 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 FBLP22087 321 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 CCND3P30281 292 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 MTHFSP49914 203 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 CASP7P55210 303 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 SPEM2Q0P670 501 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 ADAM15Q13444 863 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 GPNMBQ14956 572 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PWP2Q15269 919 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 ZYXQ15942 572 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 TRIM60Q495X7 471 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 HSP90AB3PQ58FF7 597 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PEAR1Q5VY43 1037 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 PDE12Q6L8Q7 609 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 CNKSR3Q6P9H4 555 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 SMRP1Q8NCR6 262 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 IL17REQ8NFR9 667 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 NEU4Q8WWR8 484 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 RPGRQ92834 1020 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 WNT8BQ93098 351 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 NKD2Q969F2 451 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 ZDHHC15Q96MV8 337 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 IDI2Q9BXS1 227 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 OSBPL5Q9H0X9 879 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 PRDM12Q9H4Q4 367 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 FLRT1Q9NZU1 646 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 ZNF70Q9UC06 446 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 ZNF232Q9UNY5 417 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PCDHB9Q9Y5E1 797 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PCDHGC5Q9Y5F6 944 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PCDHGA2Q9Y5H1 932 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 HCFC2Q9Y5Z7 792 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 TACC3Q9Y6A5 838 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 MYH7P12883 1935 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PTPRDP23468 1912 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 CACNA1AO00555 2505 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 FCGBPQ9Y6R7 5405 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 A0A087WV48 116 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 RBM47A0AV96 593 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 MEGF11A6BM72 1044 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 MYMKA6NI61 221 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 SEPT4O43236 478 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 PPP1R12BO60237 982 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 RAD17O75943 681 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 BMP15O95972 392 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 LMNAP02545 664 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 CSF1RP07333 972 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 RGS2P41220 211 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 CENPCQ03188 943 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 TFF2Q03403 129 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 TNFAIP1Q13829 316 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 FAM50AQ14320 339 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 RRS1Q15050 365 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 TARBP2Q15633 366 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 MTHFSDQ2M296 383 aaKnown RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 NRN1LQ496H8 165 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 ZNF530Q6P9A1 599 aaPredicted RBP0.49□□□□□ -2.33
CEP290-203ENST00000547691 CCDC129Q6ZRS4 1044 aa0.49□□□□□ -2.33
CEP290-203ENST00000547691 RAB44Q7Z6P3 723 aaPredicted RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms