RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PARNO95453 639 aaKnown RBP13.34□□□□□ -0.27
RAB5C-204ENST00000547517 SFNP31947 248 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
RAB5C-204ENST00000547517 GPNMBQ14956 572 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 UGCGQ16739 394 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 Q7L0L9 218 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 FAM49AQ9H0Q0 323 aaPredicted RBP13.34□□□□□ -0.27
RAB5C-204ENST00000547517 KCNMB3Q9NPA1 279 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
RAB5C-204ENST00000547517 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
RAB5C-204ENST00000547517 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.33□□□□□ -0.28
RAB5C-204ENST00000547517 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.33□□□□□ -0.28
RAB5C-204ENST00000547517 WNT7AO00755 349 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 CXCL10P02778 98 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 ATP4AP20648 1035 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 PRKCEQ02156 737 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 FBXO18Q8NFZ0 1043 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 DNAJB3Q8WWF6 145 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 VAV3Q9UKW4 847 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 SLC4A7Q9Y6M7 1214 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 TET1Q8NFU7 2136 aa13.33□□□□□ -0.28
RAB5C-204ENST00000547517 COL1A2P08123 1366 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 TBX3O15119 743 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 ZNF862O60290 1169 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 NEMFO60524 1076 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 BAIAP3O94812 1187 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 OATP04181 439 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 ATP2B1P20020 1258 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 DNAJB2P25686 324 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 PBX2P40425 430 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 CALCRLQ16602 461 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 ZNF697Q5TEC3 545 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 MTHFD1LQ6UB35 978 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 B3GNT9Q6UX72 402 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 DEFB123Q8N688 67 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
RAB5C-204ENST00000547517 HAS1Q92839 578 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 FAM167AQ96KS9 214 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 FAM161BQ96MY7 647 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 OSBPL7Q9BZF2 842 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
RAB5C-204ENST00000547517 SIP14410 1827 aa13.32□□□□□ -0.28
RAB5C-204ENST00000547517 MYH9P35579 1960 aaKnown RBP13.31□□□□□ -0.28
RAB5C-204ENST00000547517 ZBTB42B2RXF5 422 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 KIF28PB7ZC32 967 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 EML1O00423 815 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 CHRNA1P02708 482 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 GHRP10912 638 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 ATP2A2P16615 1042 aaKnown RBP13.31□□□□□ -0.28
RAB5C-204ENST00000547517 KLRC1P26715 233 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 GJB2P29033 226 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 MCM7P33993 719 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 KCNJ6P48051 423 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 MRPS6P82932 125 aaKnown RBP13.31□□□□□ -0.28
RAB5C-204ENST00000547517 MGAT3Q09327 533 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 TMEM62Q0P6H9 643 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 PPP2R5CQ13362 524 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 ZNF484Q5JVG2 852 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 FAM26DQ5JW98 314 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 NCAPH2Q6IBW4 605 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 SLFN12Q8IYM2 578 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 BANK1Q8NDB2 785 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 PBX4Q9BYU1 374 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 SEPT9Q9UHD8 586 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-204ENST00000547517 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 SMC3Q9UQE7 1217 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 PCDHA2Q9Y5H9 948 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 CDY2AQ9Y6F7 541 aa13.31□□□□□ -0.28
RAB5C-204ENST00000547517 SMIM35A0A1B0GVV1 85 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 M0QZ92 97 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
RAB5C-204ENST00000547517 C22orf31O95567 290 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
RAB5C-204ENST00000547517 RABGGTBP53611 331 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 WDR5P61964 334 aaKnown RBP13.3□□□□□ -0.28
RAB5C-204ENST00000547517 PLEKHG4Q58EX7 1191 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 SEPT8Q92599 483 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 TIFAQ96CG3 184 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 SLC9A7Q96T83 725 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-204ENST00000547517 TRPV2Q9Y5S1 764 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 WDR81Q562E7 1941 aa13.3□□□□□ -0.28
RAB5C-204ENST00000547517 GBF1Q92538 1859 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 ABHD14A-ACY1A0A1B0GW23 586 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 PSMC5P62195 406 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 DEFB103AP81534 67 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 IKBKEQ14164 716 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 LPIN1Q14693 890 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms