RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 LENG9Q96B70 501 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 MASTLQ96GX5 879 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.01■□□□□ 0.15
LETMD1-209ENST00000547318 DNAJC18Q9H819 358 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 TMEM59LQ9UK28 342 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 SERPINA10Q9UK55 444 aa16.01■□□□□ 0.15
LETMD1-209ENST00000547318 TRPC5Q9UL62 973 aaPredicted RBP16.01■□□□□ 0.15
LETMD1-209ENST00000547318 ENTPD3O75355 529 aa16■□□□□ 0.15
LETMD1-209ENST00000547318 CUL1Q13616 776 aa16■□□□□ 0.15
LETMD1-209ENST00000547318 SFR1Q86XK3 245 aa16■□□□□ 0.15
LETMD1-209ENST00000547318 USP38Q8NB14 1042 aa16■□□□□ 0.15
LETMD1-209ENST00000547318 TBC1D7Q9P0N9 293 aa16■□□□□ 0.15
LETMD1-209ENST00000547318 NENFQ9UMX5 172 aa16■□□□□ 0.15
LETMD1-209ENST00000547318 DIS3Q9Y2L1 958 aaKnown RBP16■□□□□ 0.15
LETMD1-209ENST00000547318 MYH10P35580 1976 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 SRRM3A6NNA2 597 aaPredicted RBP15.99■□□□□ 0.15
LETMD1-209ENST00000547318 NCK2O43639 380 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
LETMD1-209ENST00000547318 NR3C1P04150 777 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 MYBP10242 640 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 RFX1P22670 979 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 PON1P27169 355 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 CXCR5P32302 372 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 SCNN1DP51172 638 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 EPHA7Q15375 998 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 DNAJC21Q5F1R6 531 aaKnown RBP15.99■□□□□ 0.15
LETMD1-209ENST00000547318 FAM182BQ5T319 152 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 DPY19L2P1Q6NXN4 242 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 GSPT2Q8IYD1 628 aaKnown RBP15.99■□□□□ 0.15
LETMD1-209ENST00000547318 SEPT12Q8IYM1 358 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 ANKRD13CQ8N6S4 541 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 HDAC7Q8WUI4 952 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 ADAMTS1Q9UHI8 967 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 VAV3Q9UKW4 847 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 RABGAP1Q9Y3P9 1069 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 F5H6K3 240 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 ZEB2O60315 1214 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 BMP3P12645 472 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 JAM2P57087 298 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 KLRC3Q07444 240 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 MYBPC2Q14324 1141 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 EZH2Q15910 746 aaKnown RBP15.99■□□□□ 0.15
LETMD1-209ENST00000547318 PPP2R5EQ16537 467 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 ABCB5Q2M3G0 1257 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 SPATS2Q86XZ4 545 aaKnown RBP15.99■□□□□ 0.15
LETMD1-209ENST00000547318 CAPS2Q9BXY5 557 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 ZHX3Q9H4I2 956 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 FEZ2Q9UHY8 353 aaPredicted RBP15.99■□□□□ 0.15
LETMD1-209ENST00000547318 NAGPAQ9UK23 515 aa15.99■□□□□ 0.15
LETMD1-209ENST00000547318 ZNF646O15015 1829 aaPredicted RBP15.98■□□□□ 0.15
LETMD1-209ENST00000547318 NPHP3-ACAD11A0A0J9YXS1 232 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 UBAP1LF5GYI3 381 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 KIF4AO95239 1232 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 MATR3P43243 847 aaKnown RBP eCLIP15.98■□□□□ 0.15
LETMD1-209ENST00000547318 NFIAQ12857 509 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 CFAP58Q5T655 872 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 LRIG3Q6UXM1 1119 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 FLAD1Q8NFF5 587 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 ASTN1O14525 1302 aa15.98■□□□□ 0.15
LETMD1-209ENST00000547318 ATXN2Q99700 1313 aaKnown RBP15.98■□□□□ 0.15
LETMD1-209ENST00000547318 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 TULP1O00294 542 aaPredicted RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 H2AFZP0C0S5 128 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 PSMC2P35998 433 aaKnown RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 STAT3P40763 770 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 PTK2Q05397 1052 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 PABPC4Q13310 644 aaKnown RBP eCLIP15.97■□□□□ 0.154e-6■■■■□ 20.1
LETMD1-209ENST00000547318 PPP2R5AQ15172 486 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 ALKBH5Q6P6C2 394 aaKnown RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 H2AFVQ71UI9 128 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 SLFN11Q7Z7L1 901 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 LRRC57Q8N9N7 239 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 SUCLA2Q9P2R7 463 aaPredicted RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 FAM198AQ9UFP1 575 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 ODF2LQ9ULJ1 636 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 EIF3HO15372 352 aaKnown RBP eCLIP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 MSH4O15457 936 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 TRIM37O94972 964 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 NDUFB10O96000 172 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 LMNB1P20700 586 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 STAT1P42224 750 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 MAGEA9P43362 315 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 IRAK1P51617 712 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 SLC7A5Q01650 507 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 PPP2R5CQ13362 524 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 ZNF571Q7Z3V5 609 aaPredicted RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 IQCKQ8N0W5 287 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 NEK9Q8TD19 979 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 SCFD2Q8WU76 684 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 SLC35C1Q96A29 364 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 LRRC45Q96CN5 670 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 EIF2AK1Q9BQI3 630 aaKnown RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 ISCUQ9H1K1 167 aa15.97■□□□□ 0.15
LETMD1-209ENST00000547318 TAF1DQ9H5J8 278 aaPredicted RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 TTC7AQ9ULT0 858 aaPredicted RBP15.97■□□□□ 0.15
LETMD1-209ENST00000547318 PGRMC1O00264 195 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms