RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 HABP4Q5JVS0 413 aaKnown RBP4.44□□□□□ -1.7
HCFC2-203ENST00000547194 LDLRAD3Q86YD5 345 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 C1orf210Q8IVY1 113 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 LMF1Q96S06 567 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 TMEM209Q96SK2 561 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 AGAP2Q99490 1192 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 CDC6Q99741 560 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 DHRS4Q9BTZ2 278 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 PDGFDQ9GZP0 370 aaPredicted RBP4.44□□□□□ -1.7
HCFC2-203ENST00000547194 MMRN2Q9H8L6 949 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 KANSL2Q9H9L4 492 aa4.44□□□□□ -1.7
HCFC2-203ENST00000547194 BLACEA4D250 179 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 FAM47E-STBD1D6RA91 191 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 AQP7O14520 342 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 CYP7B1O75881 506 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 SOD2P04179 222 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 C6orf222P0C671 652 aaPredicted RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 GNAT1P11488 350 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 SUMO1P63165 101 aaKnown RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 MAMDC2Q7Z304 686 aaPredicted RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 GPR155Q7Z3F1 870 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 RALYLQ86SE5 291 aaKnown RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 DHX37Q8IY37 1157 aaKnown RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 ANKRD13AQ8IZ07 590 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 KLHL36Q8N4N3 616 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 ZSWIM2Q8NEG5 633 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 UHMK1Q8TAS1 419 aaKnown RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 IPO9Q96P70 1041 aaKnown RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 WRNIP1Q96S55 665 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 ALG1Q9BT22 464 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 MRPS23Q9Y3D9 190 aaKnown RBP4.43□□□□□ -1.7
HCFC2-203ENST00000547194 PTCH2Q9Y6C5 1203 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 ASXL2Q76L83 1435 aa4.43□□□□□ -1.7
HCFC2-203ENST00000547194 CNOT4O95628 575 aaKnown RBP4.42□□□□□ -1.7
HCFC2-203ENST00000547194 LTFP02788 710 aa4.42□□□□□ -1.7
HCFC2-203ENST00000547194 COL6A2P12110 1019 aa4.42□□□□□ -1.7
HCFC2-203ENST00000547194 SQSTM1Q13501 440 aa4.42□□□□□ -1.7
HCFC2-203ENST00000547194 SH3TC2Q8TF17 1288 aa4.42□□□□□ -1.7
HCFC2-203ENST00000547194 CLEC4DQ8WXI8 215 aa4.42□□□□□ -1.7
HCFC2-203ENST00000547194 PTPRN2Q92932 1015 aa4.42□□□□□ -1.7
HCFC2-203ENST00000547194 RNPC3Q96LT9 517 aaKnown RBP4.42□□□□□ -1.7
HCFC2-203ENST00000547194 KCNJ15Q99712 375 aa4.42□□□□□ -1.7
HCFC2-203ENST00000547194 CCDC163A0A0D9SF12 145 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 WNT9AO14904 365 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 PLSCR1O15162 318 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 NKRFO15226 690 aaKnown RBP eCLIP4.41□□□□□ -1.7
HCFC2-203ENST00000547194 NAT1P18440 290 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 BMP5P22003 454 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 PAK1Q13153 545 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 TUSC3Q13454 348 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 AGBL4Q5VU57 503 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 MRGPRGQ86SM5 289 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 NOP9Q86U38 636 aaKnown RBP4.41□□□□□ -1.7
HCFC2-203ENST00000547194 TAX1BP1Q86VP1 789 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 JAZF1Q86VZ6 243 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 PROSER1Q86XN7 944 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 LARP4BQ92615 738 aaKnown RBP4.41□□□□□ -1.7
HCFC2-203ENST00000547194 IPPKQ9H8X2 491 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 TMEM260Q9NX78 707 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 DSEQ9UL01 958 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 REXO2Q9Y3B8 237 aaKnown RBP4.41□□□□□ -1.7
HCFC2-203ENST00000547194 TRAF6Q9Y4K3 522 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
HCFC2-203ENST00000547194 FAHP16930 419 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 ACO1P21399 889 aaKnown RBP4.4□□□□□ -1.71
HCFC2-203ENST00000547194 COMTP21964 271 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 EPHA5P54756 1037 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 GABREP78334 506 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 FSTL1Q12841 308 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 PAN2Q504Q3 1202 aaKnown RBP4.4□□□□□ -1.71
HCFC2-203ENST00000547194 TRIM61Q5EBN2 209 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 VASNQ6EMK4 673 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.4□□□□□ -1.71
HCFC2-203ENST00000547194 GLCCI1Q86VQ1 547 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 FUKQ8N0W3 1084 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 DTX3Q8N9I9 347 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 NUDT10Q8NFP7 164 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 NUDT11Q96G61 164 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 TBX22Q9Y458 520 aa4.4□□□□□ -1.71
HCFC2-203ENST00000547194 ESYT3A0FGR9 886 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 KCNQ2O43526 872 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 RAMP2O60895 175 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 COL6A1P12109 1028 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 GLRBP48167 497 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 KRTAP10-9P60411 292 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 KCTD1Q719H9 257 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 MTDHQ86UE4 582 aaKnown RBP4.39□□□□□ -1.71
HCFC2-203ENST00000547194 GSTCDQ8NEC7 633 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 PSMD1Q99460 953 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 MRPL4Q9BYD3 311 aaKnown RBP4.39□□□□□ -1.71
HCFC2-203ENST00000547194 NCOA5Q9HCD5 579 aaKnown RBP4.39□□□□□ -1.71
HCFC2-203ENST00000547194 TELO2Q9Y4R8 837 aa4.39□□□□□ -1.71
HCFC2-203ENST00000547194 MRPL42Q9Y6G3 142 aaKnown RBP4.39□□□□□ -1.71
HCFC2-203ENST00000547194 ARVCFO00192 962 aa4.38□□□□□ -1.71
HCFC2-203ENST00000547194 GSTA4O15217 222 aa4.38□□□□□ -1.71
HCFC2-203ENST00000547194 CHGBP05060 677 aa4.38□□□□□ -1.71
HCFC2-203ENST00000547194 CKMP06732 381 aa4.38□□□□□ -1.71
HCFC2-203ENST00000547194 MRPS21P82921 87 aaKnown RBP4.38□□□□□ -1.71
HCFC2-203ENST00000547194 GUCY1A3Q02108 690 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms