RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 LRRC53A6NM62 1247 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 SFI1A8K8P3 1242 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 C19orf81C9J6K1 198 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 SLC16A3O15427 465 aaKnown RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 P4HBP07237 508 aaKnown RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 GUCY2CP25092 1073 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 ZNF131P52739 623 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 RPS6P62753 249 aaKnown RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 MRPS9P82933 396 aaKnown RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 STXBP4Q6ZWJ1 553 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 ZKSCAN4Q969J2 545 aaPredicted RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 WRAP73Q9P2S5 460 aaPredicted RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 ARHGEF35A5YM69 484 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 NR3C1P04150 777 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 EPS15P42566 896 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 KCNH2Q12809 1159 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 NFIL3Q16649 462 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 RNF207Q6ZRF8 634 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 CEP112Q8N8E3 955 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 LSM14BQ9BX40 385 aaKnown RBP20.53■□□□□ 0.88
VDR-204ENST00000547065 TSGA10Q9BZW7 698 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 ZSWIM4Q9H7M6 989 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 POLD4Q9HCU8 107 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 ARHGAP20Q9P2F6 1191 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 PPP2R3BQ9Y5P8 575 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 UBE4BO95155 1302 aa20.53■□□□□ 0.88
VDR-204ENST00000547065 NOL4O94818 638 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 LCA5LO95447 670 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 EIF4A3P38919 411 aaKnown RBP20.52■□□□□ 0.88
VDR-204ENST00000547065 TUBB4BP68371 445 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 MTMR1Q13613 665 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 PGM5Q15124 567 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 XRRA1Q6P2D8 792 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 BANK1Q8NDB2 785 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 ATG4CQ96DT6 458 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 GPRC5DQ9NZD1 345 aa20.52■□□□□ 0.88
VDR-204ENST00000547065 GOLGB1Q14789 3259 aaKnown RBP20.52■□□□□ 0.88
VDR-204ENST00000547065 DDX39AO00148 427 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 ASTN1O14525 1302 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 VAV2P52735 878 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 OAZ1P54368 228 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 ITGB3BPQ13352 177 aaPredicted RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 FBXO38Q6PIJ6 1188 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 RSRC2Q7L4I2 434 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 ZNF720Q7Z2F6 126 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 RMDN3Q96TC7 470 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 BCAS3Q9H6U6 928 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 TRIM10Q9UDY6 481 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 DBR1Q9UK59 544 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 ZHX2Q9Y6X8 837 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 SSU72P8A0A1W2PR75 194 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 USO1O60763 962 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 AFPP02771 609 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 EPB41P11171 864 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 H2AFXP16104 143 aaPredicted RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 EIF2AK2P19525 551 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 NMT1P30419 496 aaKnown RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 KIF5AQ12840 1032 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 MAPK8IP2Q13387 824 aaPredicted RBP20.51■□□□□ 0.87
VDR-204ENST00000547065 SFMBT2Q5VUG0 894 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 GOLGA1Q92805 767 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 DEF6Q9H4E7 631 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 PKD2L1Q9P0L9 805 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 PCDHB13Q9Y5F0 798 aa20.51■□□□□ 0.87
VDR-204ENST00000547065 TGFB1I1O43294 461 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 AKAP3O75969 853 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 LYPLA2O95372 231 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 PLEKP08567 350 aaPredicted RBP20.5■□□□□ 0.87
VDR-204ENST00000547065 DSG3P32926 999 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 KIF11P52732 1056 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 WHAMMP3Q1A5X7 153 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 ARHGEF16Q5VV41 709 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 PRAMEF18Q5VWM3 479 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 FAM178BQ8IXR5 827 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 GPR161Q8N6U8 529 aaKnown RBP20.5■□□□□ 0.87
VDR-204ENST00000547065 NLGN2Q8NFZ4 835 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 TRPM4Q8TD43 1214 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 FIZ1Q96SL8 496 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 PDCD2LQ9BRP1 358 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 RNF146Q9NTX7 359 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 ADAMTS5Q9UNA0 930 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 PCDHA13Q9Y5I0 950 aa20.5■□□□□ 0.87
VDR-204ENST00000547065 AKR1B10O60218 316 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 MYCLP12524 364 aaPredicted RBP20.49■□□□□ 0.87
VDR-204ENST00000547065 XRCC5P13010 732 aaKnown RBP20.49■□□□□ 0.87
VDR-204ENST00000547065 QARSP47897 775 aaKnown RBP20.49■□□□□ 0.87
VDR-204ENST00000547065 POLR2FP61218 127 aaKnown RBP20.49■□□□□ 0.87
VDR-204ENST00000547065 CYP27A1Q02318 531 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 COG2Q14746 738 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 SUPT20HL1Q3ZLR7 823 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 PADI6Q6TGC4 694 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 NSMFQ6X4W1 530 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 GPC2Q8N158 579 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 TXLNBQ8N3L3 684 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 REPS2Q8NFH8 660 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 RABGGTAQ92696 567 aa20.49■□□□□ 0.87
VDR-204ENST00000547065 KLRG1Q96E93 195 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms